Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2565 |
Symbol | |
ID | 7970042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2708436 |
End bp | 2709875 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644793152 |
Product | cobyric acid synthase CobQ |
Protein accession | YP_002944457 |
Protein GI | 239815547 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1492] Cobyric acid synthase |
TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.263598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACCC GATGCGTGAT GGTTCTCGGC ACGACCAGTG GCGCCGGCAA GAGCTGGCTG ACCGCCGCGC TGTGCCGCTG GTACGCGCGC CAGGGCCTCA AGGTGGCGCC CTTCAAGGCG CAGAACATGA GCAACAACGC CCGCGTGGTG GGCGGCGGCG AGATCGGCAG CGCGCAGTAT TTCCAGGCAC TGGCCGCGCG TGCCGTGCCC GACGTGCGCA TGAACCCGCT GCTGCTCAAG CCCGAGCGCG ACACCCACAG CCAGGTGGTG CTGATGGGGC AGGTGAGCGC GGAGCTCACG GCCATGCCCT GGCGCGGACG CAGCGAGCGC GTGTGGCCGC AGATCGCGCA GGCGCTCGAC GCGCTGCGTG CCGAGAACGA CGTGGTCGTG ATCGAAGGCG CCGGCTCGCC GGCCGAGATC AACCTGATGG CCAGCGACAT CGTCAACCTG CGCGTGGCCC GCCATGCGGA TGCGCGCTGC CTGCTGGTGA CCGACATCGA CCGTGGTGGC GCCTTCGCGC ATCTGTACGG CACCTGGGCA TTGATGCCCG AAAGCGACCG CGCGCTGCTG CGCGGCTTCG TGCTCAACAA GTTCCGCGGA GATGCTTCGC TCCTGGCGCC GGCGCCGCAG CAGCTGCAGG CGCTGACCGG CATCGCCACC GTCGCCACGC TGCCGATGTG GCGGGAGCAC GGCCTGCCGG AAGAAGACGG CGTGTTCGAT GACCGAAGCC ATGCGAGCGG TGCGGTGACC CGCACCGTTG CGGTCGTGGC CTACCCGCGC ATCAGCAACC TCGACGAATT CCAGCCGCTC AAGAACGTGC CCGGCGTCCG CCTGGCCTGG GCGCGCACGC CGGCGGAGCT GGCCGGCGCC GACTGGATCG TGCTGCCCGG CTCCAAGCAC ACCAGCGGCG ATCTCGCGTG GCTGCGCGCG CAGGGGCTGG ACCGCGCCAT CGCGGCGCAC GCGGCCCGCG GCGGCGCCGT GCTGGGCGTC TGCGGCGGCC TGCAGATGCT GGGCGAGGCG CTGGTCGATC CGCACGGCAT CGACGGCAAT GCGCCCGGCC TGGGCCTGCT GCCGCTGGTG ACGGTGTTCG AGCGCGAAAA GACCGTGCGC CACCGGGCGG CCGTCTTCGG CCAACTGGGC GGCGCATGGG CGTCGCTCTC GAACGTGCCG GTGGCGGGCT ACGAAATCCA TCACGGCCAA ACCGCCATCC ACCCCCAGAT GGCGCAGGAC GGCCATGCCG TGATGCCCGA GGGCCTGGCC TGGCAGAACG CGCGCGGCAA CGTGCTGGGC CTCTATCTGC ACGGCCTGTT CGAGGACGCG GCCGCGCTCC ACGCACTCTT CGGTGCCGCG GCACCCACGC TCGACGCCAC CTTCGACGGC CTGGCCGATT TCATCGACAA CCACTTCGAG GCCGGCGTAC TGCAGGGCCT GATCGCATGA
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Protein sequence | MTTRCVMVLG TTSGAGKSWL TAALCRWYAR QGLKVAPFKA QNMSNNARVV GGGEIGSAQY FQALAARAVP DVRMNPLLLK PERDTHSQVV LMGQVSAELT AMPWRGRSER VWPQIAQALD ALRAENDVVV IEGAGSPAEI NLMASDIVNL RVARHADARC LLVTDIDRGG AFAHLYGTWA LMPESDRALL RGFVLNKFRG DASLLAPAPQ QLQALTGIAT VATLPMWREH GLPEEDGVFD DRSHASGAVT RTVAVVAYPR ISNLDEFQPL KNVPGVRLAW ARTPAELAGA DWIVLPGSKH TSGDLAWLRA QGLDRAIAAH AARGGAVLGV CGGLQMLGEA LVDPHGIDGN APGLGLLPLV TVFEREKTVR HRAAVFGQLG GAWASLSNVP VAGYEIHHGQ TAIHPQMAQD GHAVMPEGLA WQNARGNVLG LYLHGLFEDA AALHALFGAA APTLDATFDG LADFIDNHFE AGVLQGLIA
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