| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2555 |
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| Symbol | |
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| ID | 7970032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2696490 |
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| End bp | 2697473 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793142 |
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| Product | cobalamin biosynthesis protein CobD |
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| Protein accession | YP_002944447 |
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| Protein GI | 239815537 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0881732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCTC CCATGCCCCC CTTTCCCCTC GAACACGCCC TGGCCGTCGT TGCCGCGCTG
TGGCTTGCGC TTGCCATCGA CTGCTGGCTG GGCGAGCCCG CTGCGTGCTG GCATCCGGTG
GTGTGGATGG GGCAGTACCT CGGCTGGATC GGCTCGCGCA TCGCACCGCC GGCGGCCAAG
GCGAAGCCGC GCGACCTGCC GCTCTTCTTG ATCGGGGCGC TGGCGTGGTG CGTGGGCGCG
ATGTGCGTGG GGGTGGTCGC CGCCGGCGTG CAGGCTGCGA TGGTGCAATG GCTGCCCGCA
TGGGCGCTGG CGGTGGCGAT GGCCTTTGCG CTGAAACCGC TTTTCGCGTG GCGCATGCTG
CACGACGAAG TGCTCGCGGT CGAGGCGGCG CTGGGCGTTT CGCTCGATGC GGGGCGCGCG
CAGCTGGGCC GGCTCGTCAG CCGCGATGTC TGCGCGCTCA GCGAGCGCGA GGTGCGCGAA
AGCGCCATCG AATCATTGGC CGAGAACCTT AACGATTCGC TCGTGGCGCC GCTGTTCTGG
TTCGTGCTAC TGGGCTTGCC GGGCGCGGCG GTCTACCGCT TCGCCAACAC GGCCGATGCG
ATGTGGGGCT ACCGCGGCGA ACGCAATGGC CGCGAGTGGA GCTGGTTCGG CAAGTGGGCC
GCGCGCGCTG ACGACCTGCT CTCGTGGCTG CCGGCGCGGC TCACGGCGCT GCTGCTTGCG
CTTGCGGCAT GGCGCTGGCC GCGCGGCGTG GCAGGCGAGG CGCGCCGCAC GCCGTCGCCC
AACAGCGGCT GGCCGATGGC GGCGATGGCA CTGCTGCTCG GCGTGCGGCT TGCCAAGCCC
GGCGTCTATG CCTTGAATGC CGAAGGACGG CCCGCCGATG CGGCCGATAC GCAGCAGGCC
GCGCGATGGG GCGGCAGGGC GGTGCTGGCC ACGGCCGCTT GTGCATCATT GGCCATCTTC
TTCGCGGCAA CCGACTGGGC ATGA
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| Protein sequence | MTAPMPPFPL EHALAVVAAL WLALAIDCWL GEPAACWHPV VWMGQYLGWI GSRIAPPAAK
AKPRDLPLFL IGALAWCVGA MCVGVVAAGV QAAMVQWLPA WALAVAMAFA LKPLFAWRML
HDEVLAVEAA LGVSLDAGRA QLGRLVSRDV CALSEREVRE SAIESLAENL NDSLVAPLFW
FVLLGLPGAA VYRFANTADA MWGYRGERNG REWSWFGKWA ARADDLLSWL PARLTALLLA
LAAWRWPRGV AGEARRTPSP NSGWPMAAMA LLLGVRLAKP GVYALNAEGR PADAADTQQA
ARWGGRAVLA TAACASLAIF FAATDWA
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