| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2550 |
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| Symbol | |
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| ID | 7970027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2692537 |
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| End bp | 2693406 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793137 |
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| Product | periplasmic binding protein |
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| Protein accession | YP_002944442 |
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| Protein GI | 239815532 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC GCTGGATTCG GTGCTTGTCC GCGGCGCTTG GCCTCGGCCT CTTCGCGCTG
GCCGCGCATG CCATCGACGT GGTCGACGAG CGCGGCGTGA CGGTGAGCCT GCCGCAGCCG
CCGCAGCGCA TCGTCACGCT GCTGCCGTCG CTGACCGAAG GCGTCTGCGC GCTGGGTGCG
TGTTCGCGGC TGGTGGGCGT CGACAACTAT TCCAATTCGC CCGACGCGGT GCGCGCCTTG
CCGCAGCTGG GCGGCGGGCT CGACCCGAAC GTCGAAGCCA TCGTGGCGCT GCGGCCCGAT
GCGGTGCTGC TCGCCAAGTC CTCGCGCGTG ACGCAGCGGC TCGAGGCGCT GGGCCTCAAG
GTGCTGGTGC TCGAACCCAA GAGCCATGCC GACGTGCGGC GCGTGCTCGA CAAGCTCGAC
CAGGTGCTCG GCACCCGCGA GGCGCCGAAC ATCTGGCGCG CGATCGATGC GGGCGTGTCG
GCCGCCGCGC AGTCGCTGCC GGCCGGGGCG AGGGGCCAGC GCGTCTACTT CGAGGTCAAC
AGCGCGCCCT ATGCGGCCGG CGAGTCGTCT TTCATCGGCG AGACGCTCGC GCGCCTGGGC
ATGAAGAACA TCGTGCCGGC TTCGCTCGGG CCCTTTCCCA AGCTCAACCC CGAATACGTG
GTGCGCGCCA ATCCCGATCT CATCATGGTC AGCGTGCGCA GCGCGGCGGG CATGGAGCAG
CGCCCGGGCT GGGGCGGCAT CCGCGCGGTG CGCGAGGGGC GCATCTGCCG CTTCGACGCC
GCGCAGTCGG ACGTGCTCGT GCGTCCCGGC CCGCGCATGG ACGAAGCCGC ACGGCTGATG
GCGCGCTGCA TCGCCGAGAA GGCCGGCTGA
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| Protein sequence | MTARWIRCLS AALGLGLFAL AAHAIDVVDE RGVTVSLPQP PQRIVTLLPS LTEGVCALGA
CSRLVGVDNY SNSPDAVRAL PQLGGGLDPN VEAIVALRPD AVLLAKSSRV TQRLEALGLK
VLVLEPKSHA DVRRVLDKLD QVLGTREAPN IWRAIDAGVS AAAQSLPAGA RGQRVYFEVN
SAPYAAGESS FIGETLARLG MKNIVPASLG PFPKLNPEYV VRANPDLIMV SVRSAAGMEQ
RPGWGGIRAV REGRICRFDA AQSDVLVRPG PRMDEAARLM ARCIAEKAG
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