Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2359 |
Symbol | |
ID | 7970402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2522787 |
End bp | 2523968 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644792941 |
Product | protein of unknown function DUF482 |
Protein accession | YP_002944252 |
Protein GI | 239815342 |
COG category | [S] Function unknown |
COG ID | [COG3146] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.597494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACGATT ATGTCATTCG GGTGGTGGCG TCGCTGTCGG ACCTGGACCC GAAAGCATGG AACGCCCTCC TCGCGGCCGA GGCGCAGCCC TCGCCCTTCA TGCGCCATGA ATACCTTTCG GCATTGCACG ACAGCGGCAG CGCCTCGCCC GAAAGCGGCT GGATGCCGCA GTTCATCACC CTGTGGCGCG GCGAGGAACT GCGGGCGGCC TGCCCGGCCT ACATCAAGAC CCACTCCTAT GGCGAATATG TCTTCGACTG GGCCTGGGCC AACGCCTACG AGCAGCATGG GCTTGCCTAC TATCCCAAGG CGGTGGTGGC CGTGCCGTTC ACGCCGGTGC CCGGCGCACG CCTGCTGGCG CGCGATGCGC AGGACCGCAC GCTGCTGGTG CAGGCACTGG TGGCCTGGTG CAGGAAGGAA GAACTGTCGT CGCTGCATCT GTTGTTCGGC GCGGACGCCG ACATTGCCGC CTGCACCGAA GCGGGCCTGA TGCTGCGCAA CACGGTGCAG TTCCACTGGA CGAATGCCGC CCCGGGGGAA TCAGGCGAGA CAGCCGGCTA CGCGGACTTC GAAGCCTTTC TTGCCAGCCT GTCGCACGAC AAGCGCAAGA AGATCCGGCA GGAGCGCCGC AAGGTGGCCG AGGCCGGCGT GACCTTTCGC TGGTCGCGCG GCGCAGACAT CGCCCGGTCG GATTGGGATT TCTTCTACCG CTGCTATGCG CGCACCTACC GCGAGCATGG CAACCCGCCC TATCTTTCGC GCGACTTCTT CCAGCGCATG GCCGACACCA TGCCCGAAGC CTGGCTGCTG TTCGTCGCCG AGCGCGGAGG AAAGCCCATC GCGGCGAGCC TGATCGCGCT GTCCACCCAC GGGGACGACG CGCTGGTGGC CTATGGCCGC TACTGGGGCG CCGTGGAGCG CGTCGACTGC CTGCATTTCG AGGCCTGCTA CTACCAGCCG CTGGCCTGGT GCATTGCCCA CGGCGCCCGG CGCTTCGAAG GCGGGGCGCA GGGCGAGCAC AAGATGGCGC GCGCATTGAT GCCGGTGAAG ACCACCAGCG CGCACTGGCT CGCGCACCCC GGCTTCGCCG ACGCGGTCGA ACGTTTTCTC GAGCGCGAGG GCGAAGGCAT CGAGAACTAC ATGGACCACC TGGGCGAACG CAGCCCCTTC AAGGCCGGCT GA
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Protein sequence | MNDYVIRVVA SLSDLDPKAW NALLAAEAQP SPFMRHEYLS ALHDSGSASP ESGWMPQFIT LWRGEELRAA CPAYIKTHSY GEYVFDWAWA NAYEQHGLAY YPKAVVAVPF TPVPGARLLA RDAQDRTLLV QALVAWCRKE ELSSLHLLFG ADADIAACTE AGLMLRNTVQ FHWTNAAPGE SGETAGYADF EAFLASLSHD KRKKIRQERR KVAEAGVTFR WSRGADIARS DWDFFYRCYA RTYREHGNPP YLSRDFFQRM ADTMPEAWLL FVAERGGKPI AASLIALSTH GDDALVAYGR YWGAVERVDC LHFEACYYQP LAWCIAHGAR RFEGGAQGEH KMARALMPVK TTSAHWLAHP GFADAVERFL EREGEGIENY MDHLGERSPF KAG
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