Gene Vapar_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2282 
Symbol 
ID7971137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2424008 
End bp2424988 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID644792864 
Productflagellar biosynthetic protein FliP 
Protein accessionYP_002944177 
Protein GI239815267 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.184042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCACG CGGCACCCAC GTTCGGTCCT CGCATGCCGC AGCTGCGGGG TTTGATTCTG 
GCCATGGCCC TGCTGGTGGC TGGCCTGATC GGCTGGCCTG CCGGCAACGC CATGGCGCAG
ACCCCTGAAG AGACGAGTTC CTCGGAGCCT GCGAACCTGC CTGCGCCCGG AACGGCGCCC
GAAGCCGCGC CGGAGATCGC CCCTGCGGCA ACGGCGCCTT CGACAACCGC GCCGCCCACC
TCGGTCTCGC CGCCTTCCAC GCCAAGGCCT GCGCCGCCCC CCGCCACGCC AGCGCGGCCC
CGGTCCGCGG CGCCGGTTGC GCCGCCGGTC GTGGCTGCTG CAACGCCAGC CACGGAAACC
GCGCAGGCCC TGCGCGTGGT GCTGGGGCTC ACCGTGCTGG CGATCCTGCC GGCGCTGCTG
GTCTGCCTTA CCAGCTTTCT GCGCATCATC GTTGTGCTGT CGATGCTTCG CCATGCCATC
GGCATGAACG AGACGCCGCC CAACACCGTG CTCATCGGCC TTGCGCTTTT TCTGACGCTG
TTCACCATGT CCCCGGTGCT GCAGAAGGTC AACCAGGATG CGTTCGAGCC TTTCATGGCT
GGCAAGCTCT CGATGCAGGA CGGCTATGGC AAGGGCATTG CGCCGCTGCG CGAGTTCATG
GTCCGCCAGA CGCGCGAGGC CGACCTGGCG CTGATGGTCG AGCTGTCGAA GGCGCCTACG
CCCAAGTCGA TGGAGGACAT CAGCAACGTC CAGCTCATTC CGTCGTTCAT GCTGTCGGAG
CTGCGTGCGG CGTTCCAGAT CGGTTTCGTG ATCTTTCTGC CGTTCCTCTT GATCGATCTG
ATCGTATCGA GCATTCTCAT GGCGCTCGGC ATGATGATGA TGCCGCCGAC CACCATTGCC
CTGCCGCTCA AGATACTGAT GTTCATCCTG GTCGATGGCT GGAGCCTCGT GCTCAAGGCC
CTGGTCGGCA GCTTTCACTG A
 
Protein sequence
MMHAAPTFGP RMPQLRGLIL AMALLVAGLI GWPAGNAMAQ TPEETSSSEP ANLPAPGTAP 
EAAPEIAPAA TAPSTTAPPT SVSPPSTPRP APPPATPARP RSAAPVAPPV VAAATPATET
AQALRVVLGL TVLAILPALL VCLTSFLRII VVLSMLRHAI GMNETPPNTV LIGLALFLTL
FTMSPVLQKV NQDAFEPFMA GKLSMQDGYG KGIAPLREFM VRQTREADLA LMVELSKAPT
PKSMEDISNV QLIPSFMLSE LRAAFQIGFV IFLPFLLIDL IVSSILMALG MMMMPPTTIA
LPLKILMFIL VDGWSLVLKA LVGSFH