| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2282 |
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| Symbol | |
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| ID | 7971137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2424008 |
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| End bp | 2424988 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792864 |
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| Product | flagellar biosynthetic protein FliP |
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| Protein accession | YP_002944177 |
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| Protein GI | 239815267 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.184042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCACG CGGCACCCAC GTTCGGTCCT CGCATGCCGC AGCTGCGGGG TTTGATTCTG
GCCATGGCCC TGCTGGTGGC TGGCCTGATC GGCTGGCCTG CCGGCAACGC CATGGCGCAG
ACCCCTGAAG AGACGAGTTC CTCGGAGCCT GCGAACCTGC CTGCGCCCGG AACGGCGCCC
GAAGCCGCGC CGGAGATCGC CCCTGCGGCA ACGGCGCCTT CGACAACCGC GCCGCCCACC
TCGGTCTCGC CGCCTTCCAC GCCAAGGCCT GCGCCGCCCC CCGCCACGCC AGCGCGGCCC
CGGTCCGCGG CGCCGGTTGC GCCGCCGGTC GTGGCTGCTG CAACGCCAGC CACGGAAACC
GCGCAGGCCC TGCGCGTGGT GCTGGGGCTC ACCGTGCTGG CGATCCTGCC GGCGCTGCTG
GTCTGCCTTA CCAGCTTTCT GCGCATCATC GTTGTGCTGT CGATGCTTCG CCATGCCATC
GGCATGAACG AGACGCCGCC CAACACCGTG CTCATCGGCC TTGCGCTTTT TCTGACGCTG
TTCACCATGT CCCCGGTGCT GCAGAAGGTC AACCAGGATG CGTTCGAGCC TTTCATGGCT
GGCAAGCTCT CGATGCAGGA CGGCTATGGC AAGGGCATTG CGCCGCTGCG CGAGTTCATG
GTCCGCCAGA CGCGCGAGGC CGACCTGGCG CTGATGGTCG AGCTGTCGAA GGCGCCTACG
CCCAAGTCGA TGGAGGACAT CAGCAACGTC CAGCTCATTC CGTCGTTCAT GCTGTCGGAG
CTGCGTGCGG CGTTCCAGAT CGGTTTCGTG ATCTTTCTGC CGTTCCTCTT GATCGATCTG
ATCGTATCGA GCATTCTCAT GGCGCTCGGC ATGATGATGA TGCCGCCGAC CACCATTGCC
CTGCCGCTCA AGATACTGAT GTTCATCCTG GTCGATGGCT GGAGCCTCGT GCTCAAGGCC
CTGGTCGGCA GCTTTCACTG A
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| Protein sequence | MMHAAPTFGP RMPQLRGLIL AMALLVAGLI GWPAGNAMAQ TPEETSSSEP ANLPAPGTAP
EAAPEIAPAA TAPSTTAPPT SVSPPSTPRP APPPATPARP RSAAPVAPPV VAAATPATET
AQALRVVLGL TVLAILPALL VCLTSFLRII VVLSMLRHAI GMNETPPNTV LIGLALFLTL
FTMSPVLQKV NQDAFEPFMA GKLSMQDGYG KGIAPLREFM VRQTREADLA LMVELSKAPT
PKSMEDISNV QLIPSFMLSE LRAAFQIGFV IFLPFLLIDL IVSSILMALG MMMMPPTTIA
LPLKILMFIL VDGWSLVLKA LVGSFH
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