| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2274 |
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| Symbol | |
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| ID | 7971129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2417700 |
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| End bp | 2419082 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792856 |
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| Product | ATPase, FliI/YscN family |
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| Protein accession | YP_002944169 |
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| Protein GI | 239815259 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.776813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTGC TCGCCGCGAG CCGCAAGGCG CTCAAGGAGA CCGACCTGCG TCGGCGCATC
GGTTGGGTGC GCGAGATGCA GGGCCTGGCC ATCGATGCGC TCGGGCCCGA TGCCGCCGTG
GGCGAGCTGT GCCGGATCAT GGTGCGCTCG CATGGCGGCC CGGCAGAAGG CGGCGCAGCG
CCGGCCAGTG TGCTTGCCGA GGTGGTGGGC CTGAAGCCCG GCCGGGTCAC GCTGATGCCT
TACGGGCCGG TGGAAGGCAT TGCGGCAGGC TGCGAAGTGC ATGCGCTCGG TGCCGATTCG
CAAATAGGTG TGGGCCCCGC CATGCTCGGC CGCGTGATCG ACGGTTTTGG CGAGCCGCTC
GACGGCCTGC CCAAGCCCGT TGCAATCCAG CGCCGGCCGC TCAAGGCAGC GCCGATCAAC
CCGATGCAAC GCCCGCCGAT CCGGCGCATC CTGGAAACGG GGGTTCGCGC GATCGATGGG
CTCTTGACGC TCGGGCAGGG CCAGCGCATC GGCATCTTTG CCGGGAGCGG CGTCGGCAAG
AGCACGCTGC TGGGCCTGCT GGCGCGCCAC GTCAAGGCGC AGGGCGGCGC GGACGGGAGC
GGCGGCATCA ACGTGATCGC ACTCATTGGC GAGCGTGGCC GGGAGGTGCG CGAATTCATC
GAGAAGCAGC TCGGACCGGA AGGCCTCGCG CGTTCGGTCG TCGTGGTGGC AACCTCCGAC
CAGCCCGCGC TGGCCCGGCT GCGCGCGGCC TATGCGGCGC TCTCCATCGC GGAGTACTTT
CGCGACGAGG GCCGGAACGT GCTGCTCACC ATGGATTCGA TCACCCGCTT TGCCATGGCA
CGGCGCGAAG TGGGGCTCTC GGCCGGCGAG CCGCCGACCG CACGCGGCTA TACGCCCTCG
GTATTCGCCG AATTGCCGGA GCTTTGCGAG CGTTGCGGCA TGGCGCCAGG CGGCGGGTCG
ATCACCGCGC TGCTTACTGT GCTGGTCGAG GGCGACGACC TCAACGAGCC GGTATCGGAT
GCACTTCGCG CCATTCTCGA CGGACATATC GTGCTGTCGC GGCAGCTGGC GCACCGCGGG
CACTACCCGG CCATCGACGT GCTCAAGAGC GTGAGCCGCC TCATGCCCGA ACTGGCGGAT
GAGGCCCAGC GTTCGCTGGC AGTGGCCGCA ATGCAGCACT TGGCCGTGCT GGAGCGCAAC
CGCCAGATGA TCGATATCGG TGCCTACGAG AAGGGCGCCA ATGCCGAACT GGACCGGGCC
ATCGACACCG AGCCCGGGCT CCAGGCATGG CTGCGGCAAA GCGTGGGTGG CGTGGGCCGC
ATGGAAGCGA TCCACGACCT GCGCGCGATC CTCGCTCCGG CTGCCGAAGG CAGAAAACCA
TGA
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| Protein sequence | MNVLAASRKA LKETDLRRRI GWVREMQGLA IDALGPDAAV GELCRIMVRS HGGPAEGGAA
PASVLAEVVG LKPGRVTLMP YGPVEGIAAG CEVHALGADS QIGVGPAMLG RVIDGFGEPL
DGLPKPVAIQ RRPLKAAPIN PMQRPPIRRI LETGVRAIDG LLTLGQGQRI GIFAGSGVGK
STLLGLLARH VKAQGGADGS GGINVIALIG ERGREVREFI EKQLGPEGLA RSVVVVATSD
QPALARLRAA YAALSIAEYF RDEGRNVLLT MDSITRFAMA RREVGLSAGE PPTARGYTPS
VFAELPELCE RCGMAPGGGS ITALLTVLVE GDDLNEPVSD ALRAILDGHI VLSRQLAHRG
HYPAIDVLKS VSRLMPELAD EAQRSLAVAA MQHLAVLERN RQMIDIGAYE KGANAELDRA
IDTEPGLQAW LRQSVGGVGR MEAIHDLRAI LAPAAEGRKP
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