| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2221 |
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| Symbol | |
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| ID | 7969935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2366617 |
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| End bp | 2367624 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792809 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944122 |
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| Protein GI | 239815212 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGTTC GTTCCGCCGG CTTTTTTTCG CGCCGCTCCT TCGTGGCCCA TGCGGCAGGT
GTGGCAGCAG GGCTTGCCAT GTTCGCCGCG GCAGCGCCTG CGGCGGCCCA GGCGTATCCC
AGCCGGCCCG TCACGCTGAT CGTTCCATGG GGTGCGGGCG GCGGCACCGA TGCCACGGCG
CGCATCATCG CGAGCCTGCT CGAAAAGGAA CTCGGCCAGC CGATGACGGT GGTGAACCGC
ACCGGCGGCA ACGGCGTGGT GGGCCATGCG GCCATTGCCG CCGCACCGCC CGACGGCTAC
ACCATCGGCA TGGCCACGGT CGAGATCGGC ATGATGCATT GGCAGGGGCT GACGCCGCTG
ACCAGTGCCT CGTACACGCC GATCGGCCTT GCCAATCTCG ACCCGGCCGG CATCCAGGTG
CGGGCCGACG CGCCCTACAA GAACGTGGCC GAGTTGCTGG CGGCCATCAA GGCCAGTCCC
GGCAAGCTCA AGGCTTCCGG CACGGGACAG GGCGGCATCT GGCACCTGGC CATCGCGGGC
CTCTTGCGCG ACCAGAAGAT CGATCCCGCG GCCGTGCCGT GGGTGCCGAG CAATGGCGCG
GCGCCGGGCC TGCAGGACGT GGTTGCGGGC GGTGTCGACA TCGCGCCGGT CTCGCTGCCC
GAGGCGCGTT CGCTGATCGA TGCGGGCAAG GTCAAGAGCC TTGCGATCAT GAGCGACAAG
CCCTCGGCCC TCTATCCCAA CGTGCCCACC CTCAAGGCGG CCATCGGCAG CGACTGGTCG
ATGGCGGCCT GGCGCGGCAT CGTCGCGCCC AAGGGCCTGC CGGCCGACGT GCGCGACAAG
CTGGCGGGCG CGCTCAAGAA AGTGGTGGCA AGCAAGGAGT ACACCGATTT CATGGCCTCG
CGCGGCTTTG GGGTGATCTA TGCGGGGCCC GACGACTTCG CTGCCTACAT GGCCAAGTCC
GACGCCGAAC TCGGCGCCGC GATGAAGGCC GTGGGTATCG TCAAGTGA
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| Protein sequence | MRVRSAGFFS RRSFVAHAAG VAAGLAMFAA AAPAAAQAYP SRPVTLIVPW GAGGGTDATA
RIIASLLEKE LGQPMTVVNR TGGNGVVGHA AIAAAPPDGY TIGMATVEIG MMHWQGLTPL
TSASYTPIGL ANLDPAGIQV RADAPYKNVA ELLAAIKASP GKLKASGTGQ GGIWHLAIAG
LLRDQKIDPA AVPWVPSNGA APGLQDVVAG GVDIAPVSLP EARSLIDAGK VKSLAIMSDK
PSALYPNVPT LKAAIGSDWS MAAWRGIVAP KGLPADVRDK LAGALKKVVA SKEYTDFMAS
RGFGVIYAGP DDFAAYMAKS DAELGAAMKA VGIVK
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