Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1933 |
Symbol | |
ID | 7971112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2067997 |
End bp | 2068896 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644792532 |
Product | glycosyl transferase family 2 |
Protein accession | YP_002943846 |
Protein GI | 239814936 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCGTG TTGCCGTATT GTTGGCTACG CATAATGGCT CCAAATGGAT TGAGGCTCAG ATTGATTCAA TTTTAAATCA AATAGGAGTC GAGGTTCAAA TATTCGTTAG TGATGATCGT TCGAGCGATA ATACATTGGC AATTCTGGAT GATTTTGCTC GAGACGAGCG AGTGTCTAGG CTGGAGAGGG TAGATGCCGG CTACGGTTCT CCGGCTGCGA ATTTTTTTCG CCTTCTCTTA GAAGCGCCCA TTGAAGTTGA TTTTGAGTAC GTCTTCTTGT CGGATCAAGA TGATTATTGG CTCCCGAATA AAATAATTTC GGCAATCCAA GAGATGCAGC TCAATAAAGC TGATTGCTAT GCTTCAGATC TGATTTGCAC CTATCCCGAT GGTGCTCGAA GATTTCTTAA AAAAAGTTAC CCGCAAACGA AGAATGATTA TCTGTTCCAA GGGGCCAGCG CCGGCTGTAC TTACGGGCTA AGCGCTCGGG CTGCCGTCAC TTTTAGAGAC ATTATTGGGC GACTGGGCGA CGCGGTCCGT AAGGATATTT CGCACGATTG GGCAATTTAC GCTGTTACTC GTTCACATGG ATTTCAATGG ACGTTGGATG CGCGAGCATA TATCGACTAC CGGCAGCACG GGGAAAATGC TTATGGCGCA TTGGGGTTGG ATTCGTATCG CAAGCGATGG CTTCTTCTTA AAAATGGATG GTACCGAAAA AACGTACTCG TGCTTGCGAG CGTTTGCTTG CTCAGTAAAG AGCAACAGAA AATCATCGAT GCAGTGAAGC GTTGGTATTT TAGAGATAGA TTTTTTTTGC TGTCAAAAGT TTGGTCATTC CGTCGACGCC CGATCGAAAA AGTATGCGTT GGAATTTTGA TTGTGCTCGG ACTCTTTTGA
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Protein sequence | MIRVAVLLAT HNGSKWIEAQ IDSILNQIGV EVQIFVSDDR SSDNTLAILD DFARDERVSR LERVDAGYGS PAANFFRLLL EAPIEVDFEY VFLSDQDDYW LPNKIISAIQ EMQLNKADCY ASDLICTYPD GARRFLKKSY PQTKNDYLFQ GASAGCTYGL SARAAVTFRD IIGRLGDAVR KDISHDWAIY AVTRSHGFQW TLDARAYIDY RQHGENAYGA LGLDSYRKRW LLLKNGWYRK NVLVLASVCL LSKEQQKIID AVKRWYFRDR FFLLSKVWSF RRRPIEKVCV GILIVLGLF
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