| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1851 |
|---|
| Symbol | |
|---|
| ID | 7970868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 1983405 |
|---|
| End bp | 1983845 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644792452 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002943767 |
|---|
| Protein GI | 239814857 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.749637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCC TGTATTTCGA CCGGCATGTG CTGTGGCCGT TCGTGCTTGG TGGGCTGGTC
GGCGTGCCCT TCGGCGTCTG GCTGCTGCCG CACCTCGACC TCGTGCTCTT CAAGGTCTGC
CTCGGTGTGC CGCTGGTGCT GTGGTGCCCT GCGATGCTGA TGTCGCAGCA CCTGCCGAAG
ATCGCCTTCG GCGGACGCTT CGCGGATGGC ATCGCCGGCA CCATCGGCGG GGCCATGGCC
GGCATCGGCG GCTTCTCCGG CACCATTCCC ACGCTCTGGT GCACGCTGCG CGGCTTCCAG
CGCGACACGC AGCGCGCGGT GATCCAGAAC TTCAACCTCT CGATGCTGGC AGTGGCGTTC
GCGCTGCACC TGGGCCTGCT GATCGCCTCG GGCGTGGCGA TGCTGGCCTC GGGGGTGCCG
GCGCTGCTGC AGCGCGGCTG A
|
|---|
| Protein sequence | MQALYFDRHV LWPFVLGGLV GVPFGVWLLP HLDLVLFKVC LGVPLVLWCP AMLMSQHLPK
IAFGGRFADG IAGTIGGAMA GIGGFSGTIP TLWCTLRGFQ RDTQRAVIQN FNLSMLAVAF
ALHLGLLIAS GVAMLASGVP ALLQRG
|
|---|
| |