| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1842 |
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| Symbol | |
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| ID | 7970859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1975445 |
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| End bp | 1975852 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792443 |
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| Product | peptidyl-tRNA hydrolase domain protein |
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| Protein accession | YP_002943758 |
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| Protein GI | 239814848 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCCGCC CACCCATCCT GATCGACCCC GACGAGGTCG AGTTCAGCGC CATCCGCGCG
CAGGGCGCGG GCGGCCAGAA CGTCAACAAG GTGTCGAGCG CGGTGCACCT GCGCTACGAC
ATCCATGCGA GCTCGCTGCC CGCCGACGTG AAGGAGCGGA TGCTCGCGCT GCGCGACAGC
CGCATCACGC AGGAGGGCGT CTTCGTGCTG AAGGCGCAGC AGCACCGCAC GCAGGAAATG
AACCGCGCCG ATGCGCTCGC GCGGCTGCAG GAGGTGGTCG ACAGCGTGGC CACGCCGCCG
CGCGTGCGGC GCGCCACCAA GCCCACCTAC GGTTCGAAGC AGCGCCGGCT CGAAGGCAAG
AGCCAGCGCT CGCAGATCAA GAACCTGCGC GGGCCGGTGC GGGACTGA
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| Protein sequence | MLRPPILIDP DEVEFSAIRA QGAGGQNVNK VSSAVHLRYD IHASSLPADV KERMLALRDS
RITQEGVFVL KAQQHRTQEM NRADALARLQ EVVDSVATPP RVRRATKPTY GSKQRRLEGK
SQRSQIKNLR GPVRD
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