Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1705 |
Symbol | |
ID | 7974773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1834460 |
End bp | 1835323 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644792304 |
Product | hypothetical protein |
Protein accession | YP_002943621 |
Protein GI | 239814711 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0851207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCTTCG TCACCGATGA CCCCAACATG CTCGACGACT GGCTGGTCGC AGGCCCCGCG GCCGCGCTCG CCGGCAGCTC CGAAGCGCGG CCCCGCGCAG TTCGCCTGCT CGGCGAAACG CTGCAGCTGT GGACCGATGA CGCCGACATG CCGCAATGCC GGCTCGGCAC ACGCGCGCTC TCGGTCCAGG CGCGCCACGG CCATCTCTGG GTCTGCCCGA GCGGCCGGCC CGCACGGCCG CTGTTCGACT TTCCCGAATA CGGCGAAGCC GGGCGCCGCA TCATCGACTG CGGCGCCATC GGCGTGGCGG TGTCGGGCTT GCGCGTGATC GAGAACTTCC TCGACATGGC GCACTTCCCC TTCGTGCATG CCGGCTTCCT GGGCCAGGTG CCGCACACCG AAGTGGCCAA GTACCAGGTG CAGGTCGATC CCGCCACGCA CGAGATCTGG GCCACCGACT GCCGCTTCTG GCAGCCCCGC GCCTCGGCCG CCCACGGCAG CGGCAGCGAA GTGCTCTACA AGTACCGGGT GATGCAGCCG CTCTCGGCCA TGCTCTACAA GTCGAGCTCG CGCGACGGCG AGCTCGATGC CATCGGCCTG TTCCTGCAGC CGCTGGACGA CGAGCACGTG ATCGCCCATA CGCTCTTGGC CTGCTACGAC GACAGCTCCA CCGATGCCGA GCTCATCGCG TTCCAGCAGA CGATCTTCGG GCAGGACAAG CCGATCCTGG AGAACCACGC CTTCAAGCGC ATGCCGCTCG AAGGCCGCGC CGAAACGCCG ACGCGAGGCG ACACCTCCTC CGTCACCTAC CGGCGCTGGC TGCGCGAGCG CGGCATGCGC TTTGGCGTGA GGCAGGCGGC ATGA
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Protein sequence | MPFVTDDPNM LDDWLVAGPA AALAGSSEAR PRAVRLLGET LQLWTDDADM PQCRLGTRAL SVQARHGHLW VCPSGRPARP LFDFPEYGEA GRRIIDCGAI GVAVSGLRVI ENFLDMAHFP FVHAGFLGQV PHTEVAKYQV QVDPATHEIW ATDCRFWQPR ASAAHGSGSE VLYKYRVMQP LSAMLYKSSS RDGELDAIGL FLQPLDDEHV IAHTLLACYD DSSTDAELIA FQQTIFGQDK PILENHAFKR MPLEGRAETP TRGDTSSVTY RRWLRERGMR FGVRQAA
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