| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1624 |
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| Symbol | |
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| ID | 7974854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1755466 |
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| End bp | 1757094 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792224 |
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| Product | Methyltransferase type 12 |
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| Protein accession | YP_002943541 |
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| Protein GI | 239814631 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4797] Predicted regulatory domain of a methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCGGC CGGCCTCGAT TCCAAAGGAC GCCGTGCCCG ATTCACTGAC TTCCACGCTC
ACGAGCTACT ACGACGCGGT GCCCTACGAG TCGCACCCGT TCCCGCAAAC TGCCGTCGAG
CACCTGGAGG CCATTGCCTT TCTGTTCGGC CTCGAGACAC CGGCCCCGTC GACCGCGCGC
GTGCTGGAAC TCGGCTGCGC GGCCGGCGGC AACCTGATTC CGTTTGCGGC GCGCCACCCC
GAAGCCAGCG CCCTGGGACT CGATCTGTCG ACGGTGCAGG TCGAGCAAGG CCGCGAGGCC
ATCGCGCGTG CCGGACTGTC GAATGTGGAG CTGCGGGCGT TCAATCTGGC GGAGATCGAT
GCATCGTTCG GCCAGTTCGA CTACATCATC TGCCACGGCG TCTACAGCTG GGTGCCGGGC
CCGGTGCAGG ACGCGATCCT GCGCGTGTGT TCGGAGAATC TGGCGCCCGA TGGCGTTGCC
TATGTCAGCT ACAACGTCTA CCCCGGCTGG AAGGCGAGGG AGATCGTGCG CGACGCGATG
ATCCTGCGCG GCGGCCCGCG CGACACGCCG GAGGAAAAGC TGTCCTATGC GCGCGGCATG
CTCGAATTCC TCGAGCAGTC GGCGCGTCCC GGCAGCGTGC TCGGCAAGAC GCTCGAGGAA
ACCATGCCGA TCGTGCGCGG GGCCAACGGC TCCTATCTGC TGCACGAGTT CCTCGAGCCC
TGCAACGCAC CGTGCTACTT CAAGGAGTTC GCGGCGCGCG CCGAGGCGAA TGGCCTCAGC
TACCTGGCAG AGGCCGAGCC GTCGACGATG TTCGTCCAGA ACTATGGAGA GAAGGTCCGC
GAGCCGCTGC TGCGCGAGTG CGGCGGCAGC CAGATCCTGA TGGAGCAGTA CCTCGACTTC
CTCGTGAACC GCACCTTCCG CCAGACGCTG CTGGTGAAGC AGGGCCGCGC CGGGGACATC
CGCTACCGGC TCGACCCGGC CCGCATTCGC GGCTTCGAGT TTGCCGGCGT GTTTGCCGCC
GCAGACGGCA GCGCGCTCAC GCTCGATGCG CGCGAGCAGC CATCCAATGC GCTGCGCAAC
CTGACGGTGA CGCTGCGGCT GCCGGTGCAC AAGGCGCTGG CACAGGTGCT CGATGCGCGC
TACCCCGCCA GCATGCCGGT CGAGGGGCTG GTGGCCGCGG TACTCGCGCT GCTGGGCGAG
CCGCGTTCGT CGGTCGAGCC CGTGGTGTTG TCGATGCTCG AGGAACTGGT GATCCTCGGC
GCTGTGCGCG TGCGGCGCGC GCCCGTGCAC GCCGCCGCGG AGGTCTCTGC CTTGCCGCGG
GCGCTGCCGT CGGTGCGCAG TGCGCCCGGC CTGGCGCTGT CGGCCGGGAG CGCGGCGAAC
GCCTGCAACC AGTGGCACGA ACTCGTGGGG CTTTCAGCGC TCGAGCGCTG CCTGCTGCCG
CTGCTCGACG GCGCGCATTC GCACGGCATG CTGGCCGACC ACCTGGCGGA CGAAGTGGGC
GCCGGCCGCT TGCGCTTCAT CCAGAACGAC CAGCCGCTGA CCGATCCATC GGTCCTGAAG
GAATTCGCAC GGCAGCAGGT GGTGCTTGGC CTGGCCGCCT TGCGGCGCAA GGCGCTGCTC
GTCGCGTGA
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| Protein sequence | MLRPASIPKD AVPDSLTSTL TSYYDAVPYE SHPFPQTAVE HLEAIAFLFG LETPAPSTAR
VLELGCAAGG NLIPFAARHP EASALGLDLS TVQVEQGREA IARAGLSNVE LRAFNLAEID
ASFGQFDYII CHGVYSWVPG PVQDAILRVC SENLAPDGVA YVSYNVYPGW KAREIVRDAM
ILRGGPRDTP EEKLSYARGM LEFLEQSARP GSVLGKTLEE TMPIVRGANG SYLLHEFLEP
CNAPCYFKEF AARAEANGLS YLAEAEPSTM FVQNYGEKVR EPLLRECGGS QILMEQYLDF
LVNRTFRQTL LVKQGRAGDI RYRLDPARIR GFEFAGVFAA ADGSALTLDA REQPSNALRN
LTVTLRLPVH KALAQVLDAR YPASMPVEGL VAAVLALLGE PRSSVEPVVL SMLEELVILG
AVRVRRAPVH AAAEVSALPR ALPSVRSAPG LALSAGSAAN ACNQWHELVG LSALERCLLP
LLDGAHSHGM LADHLADEVG AGRLRFIQND QPLTDPSVLK EFARQQVVLG LAALRRKALL
VA
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