| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1540 |
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| Symbol | |
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| ID | 7973140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1663432 |
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| End bp | 1664478 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792140 |
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| Product | homoserine kinase |
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| Protein accession | YP_002943457 |
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| Protein GI | 239814547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTT TTACCGAAGT CGAGTTCGGC GAGGCGGACG CGCTCGTGCA GCGCCTGGGC
CTCGGCCCGC TGCGCGAGCT GCGCGGCATC GAGGGCGGCA TCGAGAACAC CAACTACTTC
GCGACCACCG AAAGCGGCGA GTTCGTGCTG ACGCTGTTCG AGCGCCTCGG CGCCGAGCAG
CTTCCCTACT ACCTTGGCCT CATGAAGCAC CTGGCGGGCC GCGGCCTGCC GGTGCCCGAG
CCGGTGGTCG ATCCGGCCAT CCAGCCGCCC TCGGGCCATG CGCTGACGAT TCCCGCGAAC
GCCCCGTGCG AACTGCTGCT CAAGGTGGCG GGCAAGCCGG CCGCACTGGT GCAGCGGCTC
TCGGGCCGCA GCGAGCTCGC GCCGGGCACC GCCCATTGCG ACGAGCTGGG CGCCCTGCTC
GCGCGCATGC ACCTGGCCGC GCGCGACTTT CCGCGCATCC AGCCGAACCT GCGCGGCCTC
GCATGGTGGA ACGACACCGT GCCGGTGGTG CTGCCCTACG TGGACGAATC GCAGGCGGCG
CTGCTGCGCG CCGAACTCGC GTATCAAAAC CACATCGCCG AATCGTCGGC CTACGCGGCG
CTGCCGCGCG GCCCGGTGCA TGCCGACATG TTCCGCGACA ACGTGATGTT CGCCACCGGT
GAAGACGCCG GCGCGGCGCC GCGCCTGACC GGCGTGTTCG ACTTCTATTT CGCGGGCACC
GACACCTGGC TGTTCGACCT GGCCGTGTGC CTGAACGACT GGGCCATCGA TCTTTCAACG
GGCCGGCACG ACGCCGAACG CGCCGATGCG CTGCTCGCGG CCTATGAAAG CGTGCGCCCG
CTGAATGCGG CTGAGCGCGC CCTGCTGCCC GCCATGCTGC GCGCCGCGGC GCTGCGCTTC
TGGATCTCGC GGCTGTGGGA CTTTCACCTG CCGCGCGAAG CCAGCATGCT GAAGCCGCAC
GACCCGGCGC ACTTCGAGCG CGTGCTGCGC GAGCGCGCCA CCCATCCGCA TGCCATGGCG
CAGTCGCTCG AGCCGCTGCC CGCCTGA
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| Protein sequence | MAVFTEVEFG EADALVQRLG LGPLRELRGI EGGIENTNYF ATTESGEFVL TLFERLGAEQ
LPYYLGLMKH LAGRGLPVPE PVVDPAIQPP SGHALTIPAN APCELLLKVA GKPAALVQRL
SGRSELAPGT AHCDELGALL ARMHLAARDF PRIQPNLRGL AWWNDTVPVV LPYVDESQAA
LLRAELAYQN HIAESSAYAA LPRGPVHADM FRDNVMFATG EDAGAAPRLT GVFDFYFAGT
DTWLFDLAVC LNDWAIDLST GRHDAERADA LLAAYESVRP LNAAERALLP AMLRAAALRF
WISRLWDFHL PREASMLKPH DPAHFERVLR ERATHPHAMA QSLEPLPA
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