| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1527 |
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| Symbol | |
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| ID | 7973126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1644644 |
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| End bp | 1645795 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644792126 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_002943444 |
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| Protein GI | 239814534 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCT CCATCATTTC CCCCAATTCC GCTCATCTGC AGGACATGCG CAAGGTGCTG
GAGGCTCGCT CCCACGCGGT CTCGGTGTTC GAAGGAGGCA AGAGCCGCAT GCAGTGGGTG
GTCGAGCAAT CGTCGCCCGA GCTGCTGCTG GTGGACGGCA TGTGCTGCGA CCCCCACGAG
GTGGCCATGG TGGAGCAGCT CACGATGCGC CATCCCGCGC TTGCGGTGGT GCTGCTGTGC
GCGATGCAGA CGCCCGAGTT TCTGATTCTT GCCATGCGTT CGGGCGTGCG CGAGGTGCTG
CCTTCGCCGC CCGAGCCGGC AGCGCTGGAA GCGGCCGTGG AGCGCATTGC GCTCAAGATG
GCCGGCACCC AGGCGCGCGA GGCGGGCCAG GTGGTCGCGT TCATGCCGTC CAAGGGCGGC
AGCGGCGCCA CCTTTCTGGC AACCAACATC GGGCATCAGC TCTCGATGCG CCGATCGGTG
CTGCTGATCG ACCTGAACCT GCAGTTCGGC GATGCGCTGT CTTACGTGAG CGACCTGCGG
CCCACCTCCA CGCTGGCCGA CGTGGCGCGC GACATCGGCC GGCTCGATGC CTCGCTGCTG
GCCGCAAGCA CGGTAAAAGT GGCGCCGGGC TTCAGCATCC TTGCAGCCCC CGAAGATCTA
TCGCGCGCAT TGGAGGTCAA GGCCGAGCAC ATCGACGCCA TCCTGCAGGT GGCCGCGGCG
CAGTATGACT TCGTGCTGTT CGACCTGGGC CTGCGCATCG ATCCGCTCGC CATCCGCGTG
CTGGACCGTG CGGACCGGAT CTTTCCGGTG CTCCAGCCCA GCCTGCCGCA CATCCGCAAT
GTGACGCGCC TCATGCAGGT GTTCAAGTCG CTCGGCTATC CGTCCGGCAA GGTCGAGCTG
CTGGTCAACC GCAGCGCCGG CGGCACGGAG ATCGGCTTGT CCGACATGCG CCGGTCGCTG
GGCGGGGCCA CGCTGGTCAG CGTGCCCGAC GGTGGCAAGG ACGTGGACGC CTCGATCAAC
CGCGGCGTGC CGCTGGCCGA GATGTCGCGC GGCAGCGCGC TCTGCAAACG GCTCGTGGAA
ATCGCGCACA CGCTCAGTCC GCGCCAGAAG GAAGCGCCAG GCTTGATCGG CCGGCTCTTC
CGCCGGGCCT GA
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| Protein sequence | MKISIISPNS AHLQDMRKVL EARSHAVSVF EGGKSRMQWV VEQSSPELLL VDGMCCDPHE
VAMVEQLTMR HPALAVVLLC AMQTPEFLIL AMRSGVREVL PSPPEPAALE AAVERIALKM
AGTQAREAGQ VVAFMPSKGG SGATFLATNI GHQLSMRRSV LLIDLNLQFG DALSYVSDLR
PTSTLADVAR DIGRLDASLL AASTVKVAPG FSILAAPEDL SRALEVKAEH IDAILQVAAA
QYDFVLFDLG LRIDPLAIRV LDRADRIFPV LQPSLPHIRN VTRLMQVFKS LGYPSGKVEL
LVNRSAGGTE IGLSDMRRSL GGATLVSVPD GGKDVDASIN RGVPLAEMSR GSALCKRLVE
IAHTLSPRQK EAPGLIGRLF RRA
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