| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1134 |
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| Symbol | |
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| ID | 7969656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1247007 |
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| End bp | 1248017 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791730 |
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| Product | putative sulfite oxidase subunit YedY |
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| Protein accession | YP_002943051 |
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| Protein GI | 239814141 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2041] Sulfite oxidase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.843909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGTTCC ATTTCCGTCC GCAGGGTCGC AGCAGCGGCT TCATCCACCC GCTTTCGAGC
GAGATCACGC CGCGCGCCGT CTACGAGGGC CGGCGAGACC TGCTCAAGCT GATGGCCGGC
GGCGCAGCCG GTGCCGCGCT CGCGAGCTTT GCGGGGCGCG AGGCCTTCGC CCAGGCCACG
GGACCGCACA AGCTGGCACT GCTGCCGGGT GCCAAGTCCG CCGTGCCGGG CGCGCAAACG
ATGGAAAAGC TCACCGAGTA CAAGGACGCG ACGAGCTACA ACAACTTCTA CGAGTTCGGC
ACCGACAAGG GCGACCCGGT CAAGAACGCC GGCACCCTGA AGACCCGCCC CTGGACCGTG
GAGGTCGAGG GCCTGGTCAA GAAGCCCGGC AAGTACGGCA TCGAAGACCT GCTCAAGCTC
AGTGCGCAGG AAGAGCGCAT CTACCGCCTG CGCTGCGTCG AGGGGTGGTC GATGGTCATT
CCCTGGGTGG GCTACTCGCT GGCCGAGCTC ATCAAGAAGG TCGAGCCGCA GGGCAATGCG
AAGTACGTCG AATTCGTGAC CCTGGCCGAT CCCAAGACCA TGCCCTTCGT GGGCTCGCGC
GTGCTCGACT GGCCCTACAC CGAAGGCCTG CGCATGGACG AGGCCATGCA TCCGCTCACG
CTGCTGGCTT TCGGCATGTA CGGCGAGGTG CTGCCCAACC AGAACGGCGC GCCGGTGCGC
ATCGTGGTGC CGTGGAAGTA CGGCTTCAAG TCGGCCAAGT CGATCGTCAA GATCCGCTTC
GTCGAGAAGG AGCCGGGCAC GGCCTGGAAC AAGGCGGCGG CGCAGGAATA CGGCTTCTAT
TCGAACGTCA ATCCGAACGT CGACCATCCG CGCTGGAGCC AGGCCACCGA GCGCCGCATC
GGCGACGGCG GCGGACTCTT CGCCAAGCGC ACCAAGACGC TGGTCTTCAA CGGCTACGAA
GCCCAGGTCG GCCAGCTCTA TGCGGGCATG GACCTGAAGA AGAACTACTG A
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| Protein sequence | MSFHFRPQGR SSGFIHPLSS EITPRAVYEG RRDLLKLMAG GAAGAALASF AGREAFAQAT
GPHKLALLPG AKSAVPGAQT MEKLTEYKDA TSYNNFYEFG TDKGDPVKNA GTLKTRPWTV
EVEGLVKKPG KYGIEDLLKL SAQEERIYRL RCVEGWSMVI PWVGYSLAEL IKKVEPQGNA
KYVEFVTLAD PKTMPFVGSR VLDWPYTEGL RMDEAMHPLT LLAFGMYGEV LPNQNGAPVR
IVVPWKYGFK SAKSIVKIRF VEKEPGTAWN KAAAQEYGFY SNVNPNVDHP RWSQATERRI
GDGGGLFAKR TKTLVFNGYE AQVGQLYAGM DLKKNY
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