| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0875 |
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| Symbol | |
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| ID | 7972091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 962996 |
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| End bp | 964039 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791473 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942794 |
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| Protein GI | 239813884 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCATT CTCCCTTCAC TCGCCACCTC AGGTTCTCGT CGTCGTTCTT CGCGCGGCGC
CTGCGCCCGG CCTTGCTGCT GGCAGGCGCC GCCCTGGGCG CGGCCGCATC GTCCGCTGCC
TTTGCGCAGG GCGACTGGCC GCAGCAGCCG GTCACGCTGA TCATGGGTTT TCCGGCCGGC
TCGGGCGTCG ACGTGGTGGC CCGCGCCATC CAGGAGCCGC TCGCGCGGCA GCTCGGAAAG
CCCGTGATCA TCGACTACAA GTCAGGCGCG GCCGGCAACA TCGCGAGCGA GTACGTGGCC
CATGCCAAGC CCGACGGCTA CACGCTTTCG TTCGGCACCG CCGCCACGCA TGGCAGCAAC
GCCGCGCTCT ACAAGAAGCT GCCGTTCGAT GTGGAGGCCG ACTTCGTGCC GGTGGCGCCG
GTGCTCGACG TCTCGAACGT GCTCACCGTC AACCCTGAGG TGATCAACGC CAGGACCTTG
AAGGAGTTCG TCGATCTCGT CAAGGCCAAC CCCGGAAAGT ACAACTATGC GTCTACAGGC
AACGGCGCCG GCACGCACAT GGCCTTTGCC GAGTTCAATT CGCGCCTCGG ATTGAACATG
GTGCACGTGC CGTACAAGGG CGGGCCCGAG GCCATCACCT CCGTGGTGCG CGGCGAGACC
TGCTGCATCA TGAACCAGGT GCAGACGGTG CTGCCGCACT ACAAGGCCGG CAAGGTGCGC
CTCCTGGGCG TGACCACCGC CGCGCCGGTG GCCGCGGTCA AGGAGGTGCC GACCATCGCC
TCCAGCGGCC TTCCGGGCAC CAAGGGCTTC GACAGCTCGA TCTGGTTCGG CATCTTCGCG
CCCAAGGGCA CCGACGCGCA GATCGTCGAC AAGCTCAACG CCGCCGTGAA GGCGGTGCTC
GAGCAGCCCG AGATCCGCGA GCGCTTCGAA AGCCAGGGCA ACACCGTGCG CATCGAATCG
CCCGCGCAGT TCAAGAAGAC GGTGCACGAC AACCGCGTGA AGTGGGCCGA GGTGGCCAGG
GCTGCGAACA TCAGCATCGA TTGA
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| Protein sequence | MIHSPFTRHL RFSSSFFARR LRPALLLAGA ALGAAASSAA FAQGDWPQQP VTLIMGFPAG
SGVDVVARAI QEPLARQLGK PVIIDYKSGA AGNIASEYVA HAKPDGYTLS FGTAATHGSN
AALYKKLPFD VEADFVPVAP VLDVSNVLTV NPEVINARTL KEFVDLVKAN PGKYNYASTG
NGAGTHMAFA EFNSRLGLNM VHVPYKGGPE AITSVVRGET CCIMNQVQTV LPHYKAGKVR
LLGVTTAAPV AAVKEVPTIA SSGLPGTKGF DSSIWFGIFA PKGTDAQIVD KLNAAVKAVL
EQPEIRERFE SQGNTVRIES PAQFKKTVHD NRVKWAEVAR AANISID
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