| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0655 |
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| Symbol | |
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| ID | 7974618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 713101 |
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| End bp | 714234 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791258 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_002942579 |
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| Protein GI | 239813669 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.582163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA AAAGCTTCGA CACCCATCGC GAGTCCATCG CGGGCCGCGC CGACGTGGCC
GACACCCCCG AGCTGGTCGC CTACTACGGC GAGCTCGAGC GCCTCAAGAC CGGCGCACTT
TGGACCGTGG CCAACAAGAT CGAGCCTTGG CAGCCCAGGT CCGAGTCGGA GCCCGTGATC
TGGCGCTACC GCGAGCTGCG CGATCACGTG CTGCGCTCGG TCGAGCTCGT CACGCCCGAG
AAGGCGGGCC GCCGCGTGAT CTACCTCGAC AACCCCGGTC GCCGCGAGGT CGCCGCCGCC
GTGGGGTGGC TCTACTCGGG CCTGCAGGTC ATGCACCCCG GTGAAGCCGC CTCGGCCCAC
GCGCACTCGG CCTCGGCCAT GCGCTTCATC ATGGAAGGTC GCGGTGCGTA CACCGTGGTC
GACGGCCACA AGATGACGCT GGAGGCCAAC GACTTCGTGC TCACGCCCAA CGGCACCTGG
CACGAGCACG GCGTGGAGGC CGACGGCCTG ACCTGCATCT GGCAGGACGG CCTGGACATC
CCGCTCGTGA ACGCGCTCGA GGCCGGCTTC TACGCCGTTC ACCCCGACCT GCGCCAGGCC
GTGGGCCATC CGGTGGACGA TTCGGTTCAC GCTTGGGGCG CAGTGGGTTT GCGTCCGCAC
AACGTGGGCT GGACCCAGCC CTACTCGCCG CTGTTTAAGT ACCAGTGGGG CCCCACCTAC
GACGCCTTGC AGCGCTACGC GGGCTCGCGC GAAGACAACC CCTTCGACGG CGCGCTCATG
CACTACACCA ACCCGGTCAC GGGCGGCCAC GTGATGGCCA CCATCGGCGC GAGCATGCAG
TTGCTGCGCC CGGGCTTCGT GGGCAAGGCC CACCGCCACA CCGGCAGCTT CCTGTATCAA
GTCGCCAAGG GCCAGGGCCA CTCGATCATC AACGGCCAGC GCTTTGACTG GCAAGAACGC
GACATCTTCT GCGTGCCTTC CTGGGCCTGG CACGAGCATG TCAACGGCTC GCAGACCGAA
GACGCCTGCC TGTTCTGCTT CAACGACCTG CCGGTCATGG AGAAGCTCGC CCTCTACCGC
GAAGACGCGC TCGCCGACAA CGGTGGGCAC CAGCCCGTGC TGCCCACGGC CTGA
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| Protein sequence | MNEKSFDTHR ESIAGRADVA DTPELVAYYG ELERLKTGAL WTVANKIEPW QPRSESEPVI
WRYRELRDHV LRSVELVTPE KAGRRVIYLD NPGRREVAAA VGWLYSGLQV MHPGEAASAH
AHSASAMRFI MEGRGAYTVV DGHKMTLEAN DFVLTPNGTW HEHGVEADGL TCIWQDGLDI
PLVNALEAGF YAVHPDLRQA VGHPVDDSVH AWGAVGLRPH NVGWTQPYSP LFKYQWGPTY
DALQRYAGSR EDNPFDGALM HYTNPVTGGH VMATIGASMQ LLRPGFVGKA HRHTGSFLYQ
VAKGQGHSII NGQRFDWQER DIFCVPSWAW HEHVNGSQTE DACLFCFNDL PVMEKLALYR
EDALADNGGH QPVLPTA
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