Gene Vapar_0651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0651 
Symbol 
ID7974614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp709758 
End bp710243 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID644791254 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002942575 
Protein GI239813665 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAACG ATCAGCCCTT CGTCGGCGCC TACCTGCCGG CCCTTCTGGC CCAGGCCTCG 
CACCTCATCT CGACCGAGTT CCACGCCATC GTCCAGGCCA ACGGCCTTTC CGTACTTGAA
TGGCGCGTGC TGGCTACGCT GGCCGACAGC GGCCCCATCA ACATCGGGCA GTTGGCCCAG
CAGAGCGTGA GTAAGCAGCC CACGGTCACG CGCCTGCTCG ACCGTATGGA ACAGCAAGGC
TACGTGGAGC GCCTGTCGGC CGCCAAGGAT CGGCGCCTCA CGATGGTGCG AATGACGCGC
GCAGGCGACA AGATGATTGC GGGGCTGATC CGCGAGGCCC ATGCGCACGA GGCTTCCGTG
CTGGAGCCCC TCGGCGCCAA GCGATCGAAG GAACTCAAGA AGGTGCTGCG CGAGCTGATC
GCGCTTCACC GCCCGGCCCT GACCGCGCCG CCCGAACCCG GCGCGCCGGA CCGCAAGGCC
CGCTGA
 
Protein sequence
MPNDQPFVGA YLPALLAQAS HLISTEFHAI VQANGLSVLE WRVLATLADS GPINIGQLAQ 
QSVSKQPTVT RLLDRMEQQG YVERLSAAKD RRLTMVRMTR AGDKMIAGLI REAHAHEASV
LEPLGAKRSK ELKKVLRELI ALHRPALTAP PEPGAPDRKA R