Gene Vapar_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0054 
Symbol 
ID7974012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp54854 
End bp55462 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID644790656 
ProductATP/cobalamin adenosyltransferase 
Protein accessionYP_002941983 
Protein GI239813073 
COG category[S] Function unknown 
COG ID[COG2096] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00636] ATP:cob(I)alamin adenosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAACC GACTCTCGCA GATCGCCACC CGCACCGGCG ACGACGGCAC CACCGGCCTC 
GGCGACAACA CCCGCGTGCC CAAGGACCAC CTGCGCGTGC ACGCGATGGG CGACGTGGAC 
GAGCTCAACT CGCAGATCGG CCTCTTGCTG TGCGAGCCCA TGCCGGAGCC CGTGCGCGAA 
CTGCTGGTCG ACGTGCAGCA CCAGCTCTTC AACCTGGGCG GCGAGCTTTC GATGCCGGGT 
TACACGCTGC TGAAGGCCGA TGCGCTGCTG CAGCTGGACA ACGCGCTGGC CGAGCACAAC 
GCCGCCTTGC CGCGCCTGGC CGAATTCATC CTGCCCGCGG GCACGCGCGC GGCCTCGCTC 
GCGCATGTGT GCCGCACGGT GGCACGGCGG GCCGAACGCG CCGTGGTGGC GCTCGGCGCA 
ACGGCCGAAC TCAACGATGC ACTGCGCCAA TATCTCAACC GGCTCAGCGA CCTGCTCTTC 
GTGCTCGCGC GCGTGCTCAA CCGGATGAAC GGCGGCGACG ACGTCTACTG GAAGAGCGAA 
CGCATGGCGC GCGCCGCGGC GGCGGCGGAT GCAGCCGAGC CCATCGACGA AGAAGGAAGT 
CCATCATGA
 
Protein sequence
MGNRLSQIAT RTGDDGTTGL GDNTRVPKDH LRVHAMGDVD ELNSQIGLLL CEPMPEPVRE 
LLVDVQHQLF NLGGELSMPG YTLLKADALL QLDNALAEHN AALPRLAEFI LPAGTRAASL 
AHVCRTVARR AERAVVALGA TAELNDALRQ YLNRLSDLLF VLARVLNRMN GGDDVYWKSE 
RMARAAAAAD AAEPIDEEGS PS