| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0979 |
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| Symbol | |
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| ID | 6962548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 1070186 |
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| End bp | 1071073 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643382234 |
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| Product | HTH-type transcriptional regulator, LysR-family |
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| Protein accession | YP_002265265 |
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| Protein GI | 209809726 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGG ATGATATTCG ATTTTTTCTT GCCGTTTATC GCTGTAATAC ATTAGGGAAA
GCAAGTGAGG AGTTAAATGT TGACCAAACG ACAATTGGAC GACGAATTAA AGCCTTCGAA
AAAGTGATCA ATCAAAATCT TTTTGTTAAG TCACCGCTGG GCTATACACT AACAAAAGAA
GGGGATAAAC TCTTAAACGA TGCGTTAGCG ATGGAGAGCG CGGCACACTC TATTGAACGA
AGAATGCATA CCAGTGATCC TGAAGGAATC GTTCGATTAA CAACAACTGA CGGTCTTGCC
TTAGATTTCA TAAATAAAGC AGTTGCTGCG ATCCAACAAT CATATCCAAA AATTTGCATC
GAACTCAGTA TTTCAACCTC TACTCTTGAT GTAAATTTAA ATGAGACAGA TATCGCAATA
CGAACAATCA GGCCCAATAG TCCAAACGTA AAAACAAAAC GTTTAGCTCA ATGGAATGTT
GGTTTATTTG CAAGTAAACA TTATATTTCG ACTCATGGTT ACCCTAACGA TAATGACAAT
TTTAAGAACC ATAATGTTGT CATTTATCAA CCCGGAGTTA CTCATAAGCA AAATGAAACA
CTAGTCGGAA AATGTAGGAA TAATGCACAT ATTACTGCTC AAGTTAATTC CAGTGCTATC
TTAAAAGACC TTATTGAACA AGGAGCAGGG ATTGGCGAAT TACCCATTTA TTACCAAAAA
GAAAGCAGTA ACCTCGTTAG ATTATTTCCA CAAAATAGCC GTAATGACGA TTTATTTGTA
TGGCTCGTCG TTCACCCTGA TTTAACCTCT GTACCACGGG TTAGAGCTGT TATTGATACT
ATTGAACGTA TTTTTTCACT TGCTGAACAT CAGGCAACAC TATTTTAA
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| Protein sequence | MNWDDIRFFL AVYRCNTLGK ASEELNVDQT TIGRRIKAFE KVINQNLFVK SPLGYTLTKE
GDKLLNDALA MESAAHSIER RMHTSDPEGI VRLTTTDGLA LDFINKAVAA IQQSYPKICI
ELSISTSTLD VNLNETDIAI RTIRPNSPNV KTKRLAQWNV GLFASKHYIS THGYPNDNDN
FKNHNVVIYQ PGVTHKQNET LVGKCRNNAH ITAQVNSSAI LKDLIEQGAG IGELPIYYQK
ESSNLVRLFP QNSRNDDLFV WLVVHPDLTS VPRVRAVIDT IERIFSLAEH QATLF
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