| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0893 |
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| Symbol | |
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| ID | 6962230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 975667 |
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| End bp | 976521 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643382161 |
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| Product | putative HTH-type regulatory protein, AraC family |
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| Protein accession | YP_002265192 |
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| Protein GI | 209809653 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.364356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTTAG TGTTTAGTAC GGTATTAGAA GCGCTTTTAT CAGAAAGAGA AAGTTTCAAT
CAAATTTGGT TTGCAGGAGA TAAGATCACG CCTCCACAAT GCAGTTACCA AGTGAATTTT
CCTCGTTTAG AGTTAGTAAT TAATGGCGAG TATTTGAATC AAATAGAAGA TTCAGAGGTT
GGGATACGTG AAGTTAAAGT CATGGCGGGT GATGCGTTAT ATATTCCTCC AAACTGTTGG
AATAAACCGA ATTGGGATGA AGACTGTTCA GTATTAAGTT TGTTATTTGG ACGCCGACAA
GTTGGGTTTA GCCTAGTGAG TAAACGCAAA GGGGAAAGTG GTTTTTATGA CGTGCAAAAA
TACAGTATTC CGACGCGAAC AGGTCATGCT ATTGATAACA TTTTAGAAGC ACTGAATGCG
TTAGCTCGTG AACCGAATAA AAAACTAATA GACGAACATT TATTATTGGC ATTACTTAGT
TATAGCATGA CAATGCTTGG TGAACCTTCA GAGACAAAGT CACCGAAAAA CCGCAGTGAA
GATCTATACC AAGGAATATG TATTTACATT CAAGAGAATT TCCATAAAAG CATAGATAGA
AGCAGTATTG CGAATCGCTT TAATATTTCT CCAAACCACT TATCTCGTAT GTTTAGACAG
CAGGGGCACA TGACGTTAGC TGATTATATT ACGTGGGTAA GGATAGAACG TGCCAAATTT
ATGCTAAAGA AATACACTTT TCGTTTAACT GAGGTGGCGA CACGCTGTGG TTTTCAGGAC
GTGAATTATT TTTATCGCGT GTTTAAAAAC AAAACAACGT ATACGCCATC TGATTATAGA
GCAATGATAA AGTAG
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| Protein sequence | MTLVFSTVLE ALLSERESFN QIWFAGDKIT PPQCSYQVNF PRLELVINGE YLNQIEDSEV
GIREVKVMAG DALYIPPNCW NKPNWDEDCS VLSLLFGRRQ VGFSLVSKRK GESGFYDVQK
YSIPTRTGHA IDNILEALNA LAREPNKKLI DEHLLLALLS YSMTMLGEPS ETKSPKNRSE
DLYQGICIYI QENFHKSIDR SSIANRFNIS PNHLSRMFRQ QGHMTLADYI TWVRIERAKF
MLKKYTFRLT EVATRCGFQD VNYFYRVFKN KTTYTPSDYR AMIK
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