| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0493 |
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| Symbol | |
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| ID | 6962603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 550775 |
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| End bp | 551557 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 643381786 |
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| Product | membrane associated GGDEF protein |
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| Protein accession | YP_002264824 |
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| Protein GI | 209809286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC CTAAAATCCC TTTAATCATC TCTGGTATTG CTACTGCTCT TTTAATAGGG
GTTATTGCCA TCAGTCATTA TGTGGGTTTT GATTCTATAT CTGACCTTTT TTTTGAAGGT
GCCATGCTGA TCTTATTGAG CTATATATTT CTTACTGTTA AATCCCATTT AACCCTATAT
CCAAAGCTTC TTATTGGTGC TTACTTACTT TTATTTAACA AGTCTTATGA TTTACTAACA
GAAATTCCTT TTTTGGATCA CTACGCTGAT AATAATGAAA TATCGGATAC CTTGCTTGAC
GACGGTACGT TATTACTCGC TTTTTTACTG ATTGCTGTCG GGTTAACAAA CATTGTAAAA
AGCCTCATTA AAGAAAGCAT GAAAGACGAT TTGACCGGGC TCTATAATCG TAAGAAATTC
CCTGAAATCA AACTATCCTC ATTTGATCTT ATCTATTTTG ATTTAAATGG ATTAAAACAA
GTGAACGATA TTAAAGGCCA CGCCGTCGGT GATTTAATGA TCATTCGCTT CGCTCAAATA
TTAAAGGCAA GTTGCTTAAA GCAAGAAATG GCCTTTCGCA TCGGTGGTGA TGAATTTATC
GTCACGATCG ATTCAGAACG AGCAAAAGAC TATATTAACG ACGTATATAC CTCATTAAAT
AATGAACCAA TTTCATTCTC ATACGGGATT GAAAAAGCAA CGAAAGAAAA CTTTGAAGAA
GCATTAATAC AATCAGATAA AGCGATGTAT AAAATGAAAA AAGCACTAAA AAAGAGCACC
TAA
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| Protein sequence | MTEPKIPLII SGIATALLIG VIAISHYVGF DSISDLFFEG AMLILLSYIF LTVKSHLTLY
PKLLIGAYLL LFNKSYDLLT EIPFLDHYAD NNEISDTLLD DGTLLLAFLL IAVGLTNIVK
SLIKESMKDD LTGLYNRKKF PEIKLSSFDL IYFDLNGLKQ VNDIKGHAVG DLMIIRFAQI
LKASCLKQEM AFRIGGDEFI VTIDSERAKD YINDVYTSLN NEPISFSYGI EKATKENFEE
ALIQSDKAMY KMKKALKKST
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