| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0301 |
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| Symbol | |
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| ID | 6961758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | - |
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| Start bp | 334750 |
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| End bp | 336144 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 643381602 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002264644 |
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| Protein GI | 209809106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAATA ACAACACGCC ACTTCAATCA AAACCATTGC AATGGTTTAC AGCAATTACC
TGCTCAATTT TAGCAGGTAT ATTGTGGCGT TTGTTTCCTC ATCCTGCTTT AATTATCGTA
TTAGGCATAC TGCCACTTGC TGTGCTTTAT GTTCTTAATC GTCCATTTTT AATGGTACTG
TTTTTTGTTA TTTTCTCTTT TTTCCGCATT CATGAAGTTT TTCCTCAGAT TTATAATCTA
AAAATCCCAT TATTACTCTC TCTCAGCTCT TTAGCTGCCT TAATTTGGCA GGTGGGCATT
ACAAAGCAAA TAAAACTGTT TTGGTGTAAA GAATTTACAT TACTAACCTG TTTTCTTATT
TTGGTTATCA TTGGTATCAT TTTTTCTGGA AACCGTCCTA TCGCTATTGA GTATTTCAAA
AATATCTATT GGAAAATAAT ACTCATGACC TTTGCGATAG CGATACTTGT TCGTAGCCCC
AATCAACTGG CTTTTACCTT AAAAGCCATC ACCATTGCGG GGGTTCTAGT TGGATTAATT
GCGATTCAAA ATAAATTGGG CGGTATTGGG CTTGTAGAAG GAACCCGAGT CACTATTGGC
CGAGAATTAG GCTCAATGCT TGGTGATCCG AATGACCTTG CCTTAGTGCT CATGTTTCCA
ACCTCATTTG CCGTTGGTTT ATTAGTGACG CATCAATTAC CTTGGCATCA ACGACTCATT
GGGTTTATCG CTATTCCTAT TCTCTTTTGG GCTGTAATGG CTACGCAAAG TCGAGGCGGA
TTATTAGGAA TGATCGCTGT ATTCGGGATT TATGGATTAC AACGTATAAA ATCGAAGATA
CTGTTGCTTT CTATTGCCAT TGCCGCAGGC AGTATCTTAT TTTTTATTGC TGGTATTTCA
GAACGGTCAT CAGGTGGAGC GGCTGAAGCA GGTATAGATG CCTCCGCCAT GGGACGTTTA
TACGCATGGG AAGCCGCGTT CAAAATGGCG GTCAGTAATC CATTAACCGG TGTTGGATTA
GATAACTTCT ACGCCAATTA CTTTTATTAC AGCCCTCACT GGGATGGTTT AAATCATGCA
GTACACAGTA CATGGTTTGG TGTATTGGCT GAAACCGGTT TTCTTGGTTT AGCGGTATTC
ATTAGCTTGG TCATTGTCTT AATCAGAAAA GCAAACCGAA CCTTACAGGC CGTAAAATTG
GTGCAAGATA ATATCGACTC CGCAATTTAT ACCAGTGCAC AAGCGGTATT TGCAGGCTTA
ATCGGTACTA TTGTCTCTGG TACCTTCTTA ACTCAAGGCT TTAACTGGCC GATTTACATT
TTGGCAGCGT TAGTGGTCTC CGTAAGTAAA ACCAGTGAGA TCGCCTTAGC CGAATTAAAT
AAATCAACGT CATAA
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| Protein sequence | MINNNTPLQS KPLQWFTAIT CSILAGILWR LFPHPALIIV LGILPLAVLY VLNRPFLMVL
FFVIFSFFRI HEVFPQIYNL KIPLLLSLSS LAALIWQVGI TKQIKLFWCK EFTLLTCFLI
LVIIGIIFSG NRPIAIEYFK NIYWKIILMT FAIAILVRSP NQLAFTLKAI TIAGVLVGLI
AIQNKLGGIG LVEGTRVTIG RELGSMLGDP NDLALVLMFP TSFAVGLLVT HQLPWHQRLI
GFIAIPILFW AVMATQSRGG LLGMIAVFGI YGLQRIKSKI LLLSIAIAAG SILFFIAGIS
ERSSGGAAEA GIDASAMGRL YAWEAAFKMA VSNPLTGVGL DNFYANYFYY SPHWDGLNHA
VHSTWFGVLA ETGFLGLAVF ISLVIVLIRK ANRTLQAVKL VQDNIDSAIY TSAQAVFAGL
IGTIVSGTFL TQGFNWPIYI LAALVVSVSK TSEIALAELN KSTS
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