| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_II0059 |
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| Symbol | |
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| ID | 6961546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011313 |
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| Strand | + |
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| Start bp | 83994 |
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| End bp | 85577 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643381388 |
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| Product | putative type I toxin secretion system, membrane transport protein |
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| Protein accession | YP_002264430 |
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| Protein GI | 209808892 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATA AACTCCATTA TTTACCGAGA TTAGGGTTCT TTGATGCTTT CTTTTTGTTT
GCATCAAGCC TAACAACAAC CTTGCTCGGC TTAGTCTTAC CCTTTTCCAT TTTAATTATT
TTTGACCGCA TATTGCCGAA TAATTCAAGC TCTTCACTCT ATTTCATTTT TGCCATCATC
TTGATCGCGA TCTTCTTAGA TTACAAAGTA AAAAACCTAG AAGAAGCCAT GGTATCTCGT
ATTGGGAATC GCTTTGAAAA GAAAATCACC AATCAATTAT TTCACGCAAT TTGTCACTCT
AATCTCTCTT TGTTTACACG ATTAGAAACT GGAGAGTACC TAGAGCGACT GACCACAATT
CCCGGGCTAA AATCCTTTTT CAGTGGCGAT CTTATTCGAT CTGCCATCAA TGCCTTTACC
TGCTTAATCA CTCTTCTGGT GATCAGTCTG ATTAACCCTG GTGCAGGGGT TATTTTAACT
CTGTCTTCCT TGTTTTTGTT ACTGATCTCT TTACATTTAT CCAAAACAAA AATCGCATTA
ATGGAGAAAA AATCAGACAT TGAAGGCATT ACCAATTCAA AAGTGATTGA GATTATTTCT
TATCCTTTAG ATATAAAAAG CCGCTCAATG GAATACCGCT TAGAAAACTT AATGGAAACG
ATGGTTAATG AGCGTGAACA TCACACCACT GAATTTGAGA AACAAGAATC TCGCTTCAAT
CTAACTCTAA ATTTAATTCA ACAATTAGCC GTCACTTTTA CTGTGGTAAG CAGTGCGATG
GCGGTGATTA ATTTGGATAT CAGCCAAGGG GTCATGGCGG CAATCATTCT ATTAACTAAC
CGTTATTTTG CCCCATACCA GCAAACAATG AGAACCATTA GTCAGTGGCG TGTAAATAAA
AGTTATATCC AACGTCTGAA TGACATTTTA TCAATGGAAG AATCTCAACA AAGAACGACG
GCACCTCAAC CAACTCCAAG AGTATTGAGT TATCACGGCA GTAAAGACTA TCATTTTACG
GCAGAAAAAA TATCCATCGT CTCTGGCCCT TCTGGTTCAG GGAAGTCGTC CATTGTAAAA
GCCTTTACCA ATAAGCCATT AGCACAAGAG TACCGCTTAT CCATCAATGG ATTAAATGCA
GATAACTATT ATCAATCAGA GACCATTAGC AACGTGGTAT TGGTCGATAA ACACAGCACT
TTTGTGGATG GAACCATTAT TGATAACATC ACCTGCTTTC GACCTCAATT ACACAAAGCG
GCGTATTCCC TGTGTGAAGC ATTATCGATA AAGAGCGACA TTGATGATCT CAAACTCGGT
TTTTATACCG ACATTACCAC CACGGGTATC AAGCCTTTTT CTCGTAAAGT ACATTTTGCA
TTATTAATTG TACGAGCATT ATTAAGTAAT AAAAAAGTCA TTCTCATTGA CGATTTTGAT
TTGGTTTTTG ATGACGATTT CAGCCTTAAC TTACTCTCTT GCCTTCGTCC GCGCATTCAG
TCTTATTTGT TTGTCATTGT CAGCAATAAG ATTAAAGACA CCGACATTAA GATCCAACAC
ACACCAATTA ATGAGGTGGC TTAG
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| Protein sequence | MMNKLHYLPR LGFFDAFFLF ASSLTTTLLG LVLPFSILII FDRILPNNSS SSLYFIFAII
LIAIFLDYKV KNLEEAMVSR IGNRFEKKIT NQLFHAICHS NLSLFTRLET GEYLERLTTI
PGLKSFFSGD LIRSAINAFT CLITLLVISL INPGAGVILT LSSLFLLLIS LHLSKTKIAL
MEKKSDIEGI TNSKVIEIIS YPLDIKSRSM EYRLENLMET MVNEREHHTT EFEKQESRFN
LTLNLIQQLA VTFTVVSSAM AVINLDISQG VMAAIILLTN RYFAPYQQTM RTISQWRVNK
SYIQRLNDIL SMEESQQRTT APQPTPRVLS YHGSKDYHFT AEKISIVSGP SGSGKSSIVK
AFTNKPLAQE YRLSINGLNA DNYYQSETIS NVVLVDKHST FVDGTIIDNI TCFRPQLHKA
AYSLCEALSI KSDIDDLKLG FYTDITTTGI KPFSRKVHFA LLIVRALLSN KKVILIDDFD
LVFDDDFSLN LLSCLRPRIQ SYLFVIVSNK IKDTDIKIQH TPINEVA
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