| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2569 |
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| Symbol | |
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| ID | 6987822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2761549 |
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| End bp | 2764677 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643380838 |
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| Product | integral membrane protein, putative multidrug resistance protein |
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| Protein accession | YP_002263916 |
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| Protein GI | 209695986 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0974879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGCAA TTATTAATGC GGCATTAAGT CGTTCTCGGA CGATGTTAAT GTTACTTACT
TTACTGCTTA TTTCTGGTGC GTTGACATAC ATAGTTATCC CCAAAGAATC GAACCCCGAT
ATCACCATTC CTATTATTTA CGTTTCAATG AGTCATCAAG GAATTTCTCC AGAAGATTCT
GAGCGTTTAC TTGTTCGGCC GATGGAGCAA GAATTACGAT CCATTGAAGG GATTAAAGAA
ATGACGTCGG TGGCGGGTGA AGGTCACGGT TCAGTGACGT TAGAGTTCTC CGTAGGAACG
GATTTAGATA AAGCGCTGAA TGACGTAAAA GATGCGGTTG ATCTTGTTAA GCCTAATTTG
CCAGAAGAGA GCGATGAGCC AACTGTTAAT GAGGTGACTT TAGCCGCAGA GCAAGCCGTT
TTATCCGTTG TGTTATATGG CACGGTACCA GAGAGAACAA CAATACAAAT TGCCCGTCAA
CTAAGAGATA AACTAGAAAG CTATAAGCAG ATATTAGAGG TTGATATTGC AGGGGATCGA
GATGATGTTG TTGAAATTAT TGTTGATCCT CTTTTACTTG AAAGTTATGG CTTAGATCAA
GCTGCTATTT ATAATTTGAT TGCTTTGAAC AACCGAGTGG TTGCCGCTGG ATTTGTGGAT
ACAGGCTATG GACGATTCTC TATCAAAGTA CCTTCCGTTT TTGAGTCATT AAAAGATGTT
TTAGAGTTAC CAATTAAGGT CGATGGTAAG CAAGTAGTGA CGTTTGGTGA TATTGCGACA
GTTCGTAAGG CGTTTAGAGA TCCAAACAGT TATGCACGAT TGAATGGTGA AAAAGCCATT
GTTTTAGATA TAAAGAAACG CTCAGGTGAG AATATTATTG AAACCGTCGA GATCGTAAAA
GCGGTTTTAT TGGGAGCCCA AGAGTTAGAG ACGTGGCCAA ATAATCTTTT AATTAAATAC
ACTTGGGATG AGTCAAAAGA CGTGAAGATC ATGCTTAATG ATCTGCAAAA TAATATTTTA
TCGGCGATAT TGTTGGTTGT TATTGTGATC ATTGCTGTAT TGGGCGCGAG AACCGCACTT
TTGGTTGGGA TCTCTATCCC CGGCTCTTTT CTTACTGGCT TATTAATGCT TTCCCTCGCA
GGATTAACCG TGAACATTGT GGTTCTATTT TCATTAATTA TGGCGGTAGG CATGTTAGTT
GATGGAGCCA TTGTTGTGAC TGAATATGCT GATAGGAGAA TGCAAGAAGG GGCTCATCGA
GTCATCGCTT ATAGAGAAGC TGCGCAAAGA ATGGCGTGGC CAATTATAGC CTCTACTGCA
ACCACTCTTG CGGCATTTGC TCCTTTATTA TTCTGGCCAG ATACGACTGG TGAGTTTATG
AAATACTTGC CATTAACTCT AATGGCGACA TTAACTGCCT CTTTATTTAT GGCTTTATTA
TTTGTTCCTG TTTTAGGCAG TTTATTTGGT AAACCCCAGC AAGTCCTCCC TGAAAAAAGG
CATAAATTAC AAGCATTAAG TAATGGTGAT TACAGTCAGG CTACTGGCAT AACTAAATTG
TATTTCAATA CATTATCGAT TGCTTTGAAG CATCCATTTA AAATACTTTG TTTGGCTGTT
GTTTTCTCTA TTGGCATTGG CTTTACTTAC GCTAAAGCGG GATTGGGGGT GGTGTTTTTC
CCAGAGGTAG ACCCTCCGTT TTTAACCGTC AAAGTTAGAT CTCATGGTGA TTTATCTATC
AATGAAAAAG ATAAGATCAT GGTGGAAGTA CAAAATGAAA TATTAGGAAT GAAGGAGTTA
GATAGTATTT ATACTCGTAC AGGGGGGGAT GATGAGATAG GCCAAATTCA AATAACACCT
ATAGATTGGC AATATCGTCG ATCAGTGAAA GAGATTATTG AAGATTTAAG AGATAAAACA
GAAAATATTG CGGGGATAGA ATTAGAATTT AGTACACCCA ATGCAGGCCC ACCAAGTGAG
CATGATTTAG TTATTGAATT GAGTTCTCGT GATGGTGAAG CATTGAATCA ATCGGTTAGA
AAAGCAAGAA ACTGGATAGA TGCCAATCCT GCTTTTACGA ATGTTAGTGA TACTTCGAAT
AAACAAGGAA TTGATTGGAA AATCGATATC CGTAGAGACG ATGCGGCACG CTTTGGTGCT
GATGCAACAT TGGTTGGTAA TACCGTACAA TTTGTCACTA ATGGATTGAA AATTGGTGAT
TACTTACCTG ATGATAATAA TGAACAAGTT GATATATTAG TACGATTTCC TAAAGAGCAC
CGAGATATTG GACGTTTTGA TGAGCTAAGG GTAAAAACCA GTCATGGTTT AATTCCTATA
ACCAATTTTG CTCGAATTAT TCCTACTCAC AAGCAAGATA CGATTCATCG AATTGATGGA
CACCGAGTAT TGACAGTAAA GGCTGATATG AGTGATGGTT ATAATTTAAG TATTGAATTA
CCAAATATTG AGCGTGGTTT AGAAGAGTTA AATTTTCCTA AAGGAGTTGT ATTTAAACTT
AGAGGTCAAA ATGAGGAGCA AAATAATTCA GCTGTTTTCC TTCAAAATGC ATTTCTTATT
GCATTAGCAG TAATGGCCAT TATTTTAGTC ACGCAGTTTA ATAGCTTTTA TCAAGCTTTC
CTTATATTAA GTGCGGTTTT ATTTTCAACC GTCGGAGTGT TTGCCGGGTT ACTTATTTTT
CAACGACCGT TTGGTATCAT TATGTCAGGT ATTGGGGTGA TTTCTCTTGC TGGCATCGTG
GTTAATAATA ATATAGTCCT GATTGATACC TATAATACAT TGCGTAAAGA AGGTATTGAG
AAAGTCGATG CCATACTCCA AACCGGAGTT CAGCGTTTAC GACCAGTATT ATTAACAACG
GTAACGACGA TTTTAGGTCT AATGCCAATG GTGCTTGAAA TGAATATTGA TTTACTTAAT
CAAAAGGTTG AATTTGGTGC ACCAAGTACT CAGTGGTGGT CTCAGTTAGC GACTGCTGTA
GCTGGTGGAC TTGCTTTTGC TACGGTGCTG ACATTAGTAC TGACACCATG CTTATTAATG
CTAGGAAGAG ATAACGTAGG AGTGGTTAAA GATATTAGTG AAAGAAAAAG CCCTAGTCTT
TATAACTAG
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| Protein sequence | MLAIINAALS RSRTMLMLLT LLLISGALTY IVIPKESNPD ITIPIIYVSM SHQGISPEDS
ERLLVRPMEQ ELRSIEGIKE MTSVAGEGHG SVTLEFSVGT DLDKALNDVK DAVDLVKPNL
PEESDEPTVN EVTLAAEQAV LSVVLYGTVP ERTTIQIARQ LRDKLESYKQ ILEVDIAGDR
DDVVEIIVDP LLLESYGLDQ AAIYNLIALN NRVVAAGFVD TGYGRFSIKV PSVFESLKDV
LELPIKVDGK QVVTFGDIAT VRKAFRDPNS YARLNGEKAI VLDIKKRSGE NIIETVEIVK
AVLLGAQELE TWPNNLLIKY TWDESKDVKI MLNDLQNNIL SAILLVVIVI IAVLGARTAL
LVGISIPGSF LTGLLMLSLA GLTVNIVVLF SLIMAVGMLV DGAIVVTEYA DRRMQEGAHR
VIAYREAAQR MAWPIIASTA TTLAAFAPLL FWPDTTGEFM KYLPLTLMAT LTASLFMALL
FVPVLGSLFG KPQQVLPEKR HKLQALSNGD YSQATGITKL YFNTLSIALK HPFKILCLAV
VFSIGIGFTY AKAGLGVVFF PEVDPPFLTV KVRSHGDLSI NEKDKIMVEV QNEILGMKEL
DSIYTRTGGD DEIGQIQITP IDWQYRRSVK EIIEDLRDKT ENIAGIELEF STPNAGPPSE
HDLVIELSSR DGEALNQSVR KARNWIDANP AFTNVSDTSN KQGIDWKIDI RRDDAARFGA
DATLVGNTVQ FVTNGLKIGD YLPDDNNEQV DILVRFPKEH RDIGRFDELR VKTSHGLIPI
TNFARIIPTH KQDTIHRIDG HRVLTVKADM SDGYNLSIEL PNIERGLEEL NFPKGVVFKL
RGQNEEQNNS AVFLQNAFLI ALAVMAIILV TQFNSFYQAF LILSAVLFST VGVFAGLLIF
QRPFGIIMSG IGVISLAGIV VNNNIVLIDT YNTLRKEGIE KVDAILQTGV QRLRPVLLTT
VTTILGLMPM VLEMNIDLLN QKVEFGAPST QWWSQLATAV AGGLAFATVL TLVLTPCLLM
LGRDNVGVVK DISERKSPSL YN
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