| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2334 |
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| Symbol | flgF |
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| ID | 6988522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 2509504 |
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| End bp | 2510229 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643380607 |
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| Product | flagellar basal body rod protein FlgF |
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| Protein accession | YP_002263691 |
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| Protein GI | 209695761 |
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| COG category | [N] Cell motility |
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| COG ID | [COG4787] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGGCG CTAAGCAAAA CATGCAAGCT ATGCAGCTTA GCTCAAACAA CCTTGCCAAC
GTAAGTACGA CTGGTTTTCG TGCTGATTTA GAGCAAGCGC GTGCAATGCA GGCGTATGGT
GAAGGTTTGC CTAGTCGCGT ATTCAGCATG ACTGAACGCC CGGGACAAAA TTTTGCACAA
GGTTCTGTCA TTACGACGGG CCGTGATTTA GATTTAACTA TTGAAGGTGA TGGTTGGATT
TCAGTAATGG ACAACACTGG CCGTGAAGGG TTGACCCGCG CAGGTAATCT AAAAATTGAT
GAGACAGGTT TGCTAATGAA TGGCAGTGGT CATTTGGTGA TGGGCGAAAA TAATGCGCCG
ATTACCTTGC CGCTTCCAAT TTCAAAAATT CAAATTGCAA AAGACGGTAC GATTTCAGTA
TTAGAGCAAG GTGCACCAGC AGAAGCCATG GCTGAAGTCG ACCGCATTAA ATTAGTAAAA
ACAGATAACC GTGATTTATT CAAAGATACG AATGGTTTGT TCCGTTCTAA AAATCCTAAT
AATGCATTTC AAGCCGACGC TAGCGTGACG GTGCTTAAAG GTGCATTGGA AGGCAGTAAC
GTAAATGCCG TAGGTGAGAT GACCAATTTA ATTGATTTGC AGCGTCAGTT TGAAATGCAA
GTCAAGATGA TGAGTACTGC TGAAGAAATG GATAAAGCTT CAAGCTCATT ATTACGTATG
GGTTAA
|
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| Protein sequence | MSGAKQNMQA MQLSSNNLAN VSTTGFRADL EQARAMQAYG EGLPSRVFSM TERPGQNFAQ
GSVITTGRDL DLTIEGDGWI SVMDNTGREG LTRAGNLKID ETGLLMNGSG HLVMGENNAP
ITLPLPISKI QIAKDGTISV LEQGAPAEAM AEVDRIKLVK TDNRDLFKDT NGLFRSKNPN
NAFQADASVT VLKGALEGSN VNAVGEMTNL IDLQRQFEMQ VKMMSTAEEM DKASSSLLRM
G
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