| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I2173 |
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| Symbol | |
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| ID | 6987636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 2334448 |
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| End bp | 2335581 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 643380457 |
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| Product | hypothetical protein, GGDEF domain |
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| Protein accession | YP_002263541 |
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| Protein GI | 209695612 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAC TACAACAGAC GTTGTCTGAA CAGATGCGCA TCAATGACCA CGAAATTGAA
CGACGAAAGG TACTGCTTAA TTTTATCGAT GAAGATGCGG ATACGCTGAA GCATTGTTTA
AAATGGGTAG AACCTTTTGT CGATGCTATT GTTGCTCGAT TTTATGTGGC TCAAACGCAA
TTGCCTGAAA TTTCTTTAGT GATCGGAGAT AAAGAAACAT TATCTCGTCT GCATGTCAGT
ATGGCTAAGT ACACGTTAGA GTTATTCAGT GGCCTGTATG ACCAAGCGTA TGTCGATAAA
CGGTTAAGAA TTGGTAAAAT TCACCATCGT ATTGGTGTGA GTCCAAAGCT TTACCTTTCT
GGTATTAATC AACTTCAGTT ACTGATTGAA GAAGTTATTG CAGAACAAGC CCACCTTTAT
AATCAATCCT CTCAAGACAT CACACTATCA TTAAGAAAGT TATTCTATTT TGATAATCAG
CTGGTGTTTG ATACTTATAT TGCCAGCTTG CAAATTGAAG TTGAATCTGC AAATCAACAG
CTTGAATTGT ACGCTCATAA TTTAGAAAAC GTGGTGGCAA AACGCACGGC AGAGCTGACG
GACTTATCGA TGAAAGATGC ATTGACTGGA TTATATAATC AACGTGCATT TTATGAATTA
CTTGAGAAAA GTTTCAATAT TACAGAGCGT TGCCAACAAC ACCTGACTTT ACTTTATATT
GATATCAATT TCTTTAAAGA AGTGAATGAT ACTCATGGAC ATAAAGCGGG GGATGAGGTC
TTAGTTGGTT TTGCTCAATC GGCAACGCAA ATTATACGAA AGATGGATTT TGTATCCCGT
TATGGCGGCG ATGAATTTTG TATCGTGTTA CCTAACACTA AAATCGAAGA AGCAAAGAAT
TTATGCTTAC GTTTAATTGA ATTGTTTGAT AAAAGCTCAG AGCATCCTGT TACGTTAAGT
ATTGGCGGGG CATCGCTGTA TCCGGGGGCT AAATTGAGTA TGGATAAATT GATTATTGCT
GCGGATAATA AAATGTATCA AGCGAAACAA ATTTGTCATG AAACTCGTCA GCATCACTTT
GAGTTAATGC CAAGAGATGA GTTGAATGTC ACTCGAATGG TAAATAATAA ATAA
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| Protein sequence | MQQLQQTLSE QMRINDHEIE RRKVLLNFID EDADTLKHCL KWVEPFVDAI VARFYVAQTQ
LPEISLVIGD KETLSRLHVS MAKYTLELFS GLYDQAYVDK RLRIGKIHHR IGVSPKLYLS
GINQLQLLIE EVIAEQAHLY NQSSQDITLS LRKLFYFDNQ LVFDTYIASL QIEVESANQQ
LELYAHNLEN VVAKRTAELT DLSMKDALTG LYNQRAFYEL LEKSFNITER CQQHLTLLYI
DINFFKEVND THGHKAGDEV LVGFAQSATQ IIRKMDFVSR YGGDEFCIVL PNTKIEEAKN
LCLRLIELFD KSSEHPVTLS IGGASLYPGA KLSMDKLIIA ADNKMYQAKQ ICHETRQHHF
ELMPRDELNV TRMVNNK
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