| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1233 |
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| Symbol | |
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| ID | 6986919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1343523 |
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| End bp | 1344458 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643379606 |
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| Product | HTH-type transcriptional regulator, LysR family |
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| Protein accession | YP_002262705 |
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| Protein GI | 209694777 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.573429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGATC GTGCCAGCCA AATGGTGATA TTTTACGCCC TAGCCAAAGC GGGAAGCTTT
ACTGCTGCCG CAAAACAAAT GGGCGTATCT ACCTCTCATG TGAGTAAACA GCTGGGAATA
TTAGAAGCAG AGCTTAACGT TAAGTTAGTA CAGCGCACGA CACGCTCGTT AACACTGACT
GATGCAGGGC AACAGTTCTA TTTGTATTGT GAAAAGATGT ACAGTGCGAT GACAGAAGCC
AGTGCAATTA TGGATAATGA ACGTGATGAG GTCGCGGGTA TCTTGCGTTT AGGGTTATCA
CAGTCTTTTG GTACCATGCA CATTATCCCA GCGATAGATA AATTACGTCA CCAATATCCA
GATCTTCAGG TCGAAGTTCG TTTGTTCGAT CATCGTGCTG ATATGCTTAA AGACGGTCTA
GATCTCTGGG TAACCAACTT TGAAGACTTA CCAGAAGGTT ACGTTGCACA GCGATTAGCG
GATTCGCATT TTGTATTGGC AGCATCACCT GATTATTTGA TTGATAAAGC GGTTCCTCAT
CATCCTCAAG ATCTCACTGA GCACAATTGC TTAACGTACC AAAGCCGTCA CCGTGACTAC
AGTAATTGGG ATTTCAGTAA AGGTAATGAA GCATTGTGTG TGAAGGTATC TGGTAATTAC
TGTGTCGATT TAGCTGAAGC GGTAAGAGAT GCCGCGATTT CAGGATGGGG CGTGGCGTAT
TTAGCCAGTT ACTTACTTAC CAATGAGTTT AATGATGGCA AATTGATTCA GCTTTTACCC
GACTGGAAAG CGAGTCAAAA AATGCCAATT TACGCGGTTT ACCCAAGCCG TAAACACCTG
CCAAGAAAGA TAAGTGCGGT GATTGATTTT TTACGAGAGC ACATTGGACA ACCGCCATAT
TGGGACAAAA CGCTAATGAA ACGGGTTAAG TTATAA
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| Protein sequence | MHDRASQMVI FYALAKAGSF TAAAKQMGVS TSHVSKQLGI LEAELNVKLV QRTTRSLTLT
DAGQQFYLYC EKMYSAMTEA SAIMDNERDE VAGILRLGLS QSFGTMHIIP AIDKLRHQYP
DLQVEVRLFD HRADMLKDGL DLWVTNFEDL PEGYVAQRLA DSHFVLAASP DYLIDKAVPH
HPQDLTEHNC LTYQSRHRDY SNWDFSKGNE ALCVKVSGNY CVDLAEAVRD AAISGWGVAY
LASYLLTNEF NDGKLIQLLP DWKASQKMPI YAVYPSRKHL PRKISAVIDF LREHIGQPPY
WDKTLMKRVK L
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