| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I1157 |
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| Symbol | ainR |
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| ID | 6986871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | - |
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| Start bp | 1258540 |
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| End bp | 1261008 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643379535 |
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| Product | autoinducer regulatory protein AinR |
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| Protein accession | YP_002262634 |
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| Protein GI | 209694706 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATTG GCTTCCCAAA AGATAAATTA CTGCTATTTA TCGCTGTATT CATTTTATTA
TGGGTAGCCT TTTTCATCCG TTCTTTATTC AAAGAGCGGA TGAAAGTTGA TCCTAAAATT
TACTATCCAT ATATAGGGTA TTCTATATTC ATCGTTTTTT GGGTTCTAAT AAATTACTAT
TTCCAATCAA ATCTTTTACT TCATTTTAGT GAACGAGTTG CCACGACGAT GGCTATTCTT
GCTAACTTAG CCTCTTATTT TGCCTTTGCA TTTGCATTTT TGTTCTCATG TCGCCTCTCA
TCAACAAGAA AGAACAAAAA GATGGCAACG TGGCAAATCA TTTTATTTTA TGCTGAAACT
ATCTTTGCAA TCACGATAAA TACAATTCCA AACCAAACAG TTACAGGAGT GACCATCGTA
GAGAAAGGCA TTTTCACTAT TCACTTTGGC CCCTTTGCTT CTTTCTTTTT TATCAATGCA
TTTCTTTTCA TTGGATTAAT TTTTTATAAT TTTTTCAAAC TAAGAAAAAG TACAATTCGA
TTAAATAAAG AAAAATCCAT TTATTTACTC TTCGGAATTG TTATTTTCAT GATTTCAACC
ATCATATCTC AAATTATCAT TCCAATTATT TGGCAAGACT TTTCATTTGC TTGGCTTCCT
CCTGCGCTTT CAGTTACTGA AGCTATATTA ATAGGTTACA CCTTGTTATA TCATCGTTTA
TATAGCCTTC GTTACCTTGC ATTTTGGATA TTATCTTATT CCTTAAATGC ACTTATTTAT
TTACTGCCTT TATTTTACAT TTATAAAGGA GCATCAGAGT CAAATTTATT ATACATGAGT
ATTTTCTTAA TCGTATTCAC AGGTTTATTC TGGGAAAAAT CCCTCAAAAG AACCAAGAAA
ATGTCTAGTT TACTTATATA TAAAGACAGA AAAACACCTG TAGAAAAGAT TTATGCCATT
GCAGAAGAAT TCAAGTTTTC AAGTAATAAT GCAATGGTAA AACTGGCTGA ATTATTAAAT
ACACCAAAAG AAGATCTTTT ATTAGTTGGG AAAAATGCTA ATTACAATAT TTTTATCCCT
CATTTAAACA AAATACATTC AGCGCTAGTA AAAGATGAGC TCGATTATCA AATTCATTAC
GCTCCAGAAA AAGACAACTC TAGTCTGCAT CAAGTACAAG AGAAAATGAA TGAAAGCAAG
ACCGCTTTAA TTTTGCCTAT TTTTGGAGAA AATAAACACA TCTCACATTT ATTAATTTCG
TCGAATAAAC GAGATGGTTC TACCTTTTCA AATGAAGAAA TATCCGCCAT TCAATGGGTC
TTAACTAAAG TTCAAGGCTA CATAGAAAGT GAACGAAAAG TACTTCAATC ACAAGCACTT
GCAAACTCTA TTGCTCATGA AATGCGTAAT CCACTATCCC AGTTACAATA CCATTTTGAA
CGCATTAAAC ATCACTCAAG CATAGATAAA GAAAATAAAG AGTTGATTAA TAATGAGCTG
AGACAAGGAA GTTTAGCGAT TCAAAGAGGC GCTCAGTTAA TTGATATCAT TTTAAGTGAA
GCAAAAAACA CGGCTATTAA TGATGAATTA TTTACCCATT ACTCTGCGGC ATTATTAACC
GAACGTATTG TCGATGAATA CGCTTTTGAT TCTGATGACA TGAAAAAAAG AATTAATATC
GATCTTTCTC AAGACTTTAT TTTCAACTTA AATGACACTC TATATAGTTT TATATTATTT
AACTTATTAA GAAACGCAGT TCATTACTTT AGTGAATGTA ATAGCACGAT ATCCATCCGT
TTAGTAAAAG GGTTCGCTTC AAATAAAGTG ATATTTAGAG ATACAGGCCC TGGTATAGAT
TCTCATATTC TACCTAATAT TTTTGATGAT TTTTTCACTC ATAACAAAGA AGGCGGCAGT
GGTTTAGGCC TCTCTTATTG CTTACGAGTA ATGCATGCCT TTGAAGGAAA CATTGCCTGT
TATTCTAAGA AAGGGGAATT TACTGAATTT GTACTTAGCT TTCCTTATAT TGAAGGCGAT
CTCACTTCTT TAATTAATCA GCAAGAGCAT CATGAGTCTG CATTGCCTTT AATTGATGTA
TACGATTCAG GGGATACGAT AAAAACGATT CTTATTGTCG ATGATAAAAA AGTGCAACGA
ATGTTAATCC AAACATTTAT AGCACAAGAT AATATGAATA TCCTGCAAGC CGAAAATGGA
GAAGAAGCAA TTTCTATTGC GATGAATCAC CCATTGGATA TTATTTTTAT GGATTCTAGA
ATGCCAGTAA TGAATGGTAT TGATGCTGCA AAAAGAATAA AACTCTCCTA CCCAAATTTA
CCGATCATTG CGTTAACGGG TGAATCCGGA CACGATGAAA TTCAGCGTAT CTCTCAAGTT
ATGGACGGTT ATCTGACAAA ACCAATATCA AAACCACAAC TCATACAAAC TCTGCACAAG
TGGGTGTAA
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| Protein sequence | MLIGFPKDKL LLFIAVFILL WVAFFIRSLF KERMKVDPKI YYPYIGYSIF IVFWVLINYY
FQSNLLLHFS ERVATTMAIL ANLASYFAFA FAFLFSCRLS STRKNKKMAT WQIILFYAET
IFAITINTIP NQTVTGVTIV EKGIFTIHFG PFASFFFINA FLFIGLIFYN FFKLRKSTIR
LNKEKSIYLL FGIVIFMIST IISQIIIPII WQDFSFAWLP PALSVTEAIL IGYTLLYHRL
YSLRYLAFWI LSYSLNALIY LLPLFYIYKG ASESNLLYMS IFLIVFTGLF WEKSLKRTKK
MSSLLIYKDR KTPVEKIYAI AEEFKFSSNN AMVKLAELLN TPKEDLLLVG KNANYNIFIP
HLNKIHSALV KDELDYQIHY APEKDNSSLH QVQEKMNESK TALILPIFGE NKHISHLLIS
SNKRDGSTFS NEEISAIQWV LTKVQGYIES ERKVLQSQAL ANSIAHEMRN PLSQLQYHFE
RIKHHSSIDK ENKELINNEL RQGSLAIQRG AQLIDIILSE AKNTAINDEL FTHYSAALLT
ERIVDEYAFD SDDMKKRINI DLSQDFIFNL NDTLYSFILF NLLRNAVHYF SECNSTISIR
LVKGFASNKV IFRDTGPGID SHILPNIFDD FFTHNKEGGS GLGLSYCLRV MHAFEGNIAC
YSKKGEFTEF VLSFPYIEGD LTSLINQQEH HESALPLIDV YDSGDTIKTI LIVDDKKVQR
MLIQTFIAQD NMNILQAENG EEAISIAMNH PLDIIFMDSR MPVMNGIDAA KRIKLSYPNL
PIIALTGESG HDEIQRISQV MDGYLTKPIS KPQLIQTLHK WV
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