| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0930 |
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| Symbol | luxQ |
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| ID | 6988765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 1027355 |
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| End bp | 1029592 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643379323 |
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| Product | autoinducer 2 sensor kinase/phosphatase LuxQ |
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| Protein accession | YP_002262426 |
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| Protein GI | 209694498 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.407663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA AAAGAAAAGT ACTGAAAAAA GCGTCGTTAG CCGATTTAAT ATTTCGTGCT
ATTTTTATTA TATTTTCTAT TTTGACCGTA GGCATTACTA TTCATACTTA TCAATTAAGC
GTGAATACCA TTAATGAAGA AGTTAAACGG AATTTAGAAC AAACATCGGC ACTATTAGAA
AATTATTTTA ATCATCGTTT AGCTATTTTA CAAATTAGAC AAGATACCGA TGCGGGCAGC
CTCGGACTAA CAGATCATTA TGGTAATGGT CGAATTTTAA ATTTAGAACA ATATTTTTCA
GATATAGAAG CTAAAGAACC CTCAAACTCA CCTGACTTTC GTTTTCTTGA AGCAAATAAT
CATGTTTTTT GGAGCGATGA TAATCATTTG TTTCTTGGTA TGAACTCTGA AAATTTAAAA
TATATTATAG ATAAAAACAT TTATATTAAT ACGTGGTATT ACTTAACGGT TACTACAGAT
GAAAAAATAA CGCATCTTTT GATTAGGCGA ACACCTGTTG TTAGTTCTTT TACTGGAGAA
GTTAGAAGTT ATTTATACAA TGCCGCAATA TTAAATAATA ATATTTCGTT TGTTCATAGT
TTAAAGAGAG TGAGTCGTAG CCAAGAAATA TTTATCGTTA ATAATAAAAA ATTAATATCG
TCAACGATAA AGAAAAGTAC CCCTAGATAC GCAGAGGTCG AAAAGTGTAT CGGAAATGGT
GTAGATACCT TTTCTGGAAA AATATTAAAT TATACCCCGC TAAAAATAAA ATCATTAAAT
GGTTCTTTAT CGATCGTATC GTTAAAAAAT AAAGAGAATG TGACTTTACT TGAACAGCGT
TTTATTTACA GTGTTGTTCT TTCCTTTTTT GTATTGATTG CTATTGCGGT ATTAGTCCGT
GGCCTATTTG AACACCGAAT TTTATTAGCA TTAAACGCGC TTCTTTCTTA TGCAAAAAGT
GTATCGAAAA AGAATGGGAA TAAGCATTAT CTTGGCAGTG GGATTCTTGA ATTTGATCAA
ATAGGCGCAA AGCTTGAAGG TATCTTTATT GAGCTTATTG AGGCAAAAGA AGAGAGTCAT
AAAGCACAAG CAGCCGCTGA AAAATTAACG CTAGTAAAAT CTGATTTTCT TGCAAGAATG
AGCCATGAAA TCCGCACGCC ACTGAATGGT ATTCTAGGGA TCTCTGGTTT ATTAAAACAA
GCGCAACTTC CTTTAGAGCA GAAAAAACAA ATTCAAATCA TTCATCAAGG GGGAGAGCAT
TTATTAGCGG TATTAAACGA TATTTTAGAT TTCTCTCAGA TAGAGCAAGA TAAGTTAAAT
ATTAATTTTG AAGAGTTTGT TCTTGATGAT GTACTCGATA CGATTAATGC GATATATACG
CCACTTTGTA TGGAAAAAAA TATTACGTTC AATCTAAATA ATAACATTGA TAATAATGTT
ATTTTATATA CAGATAAAGT TCGATTAACT CAAATCCTAT TTAATTTATT GAGTAATGGC
GTGAAGTTTA CTGAGATTGG ACAGGTCACC CTTAGCTTAA ATCTTGAATC AAAAAATGGA
CAAATATTTT TATGTTTTGA TGTTGAGGAT ACCGGGGTTG GTATTGATAT TGAAAACCAA
GCATCGGTGT TTGACCCATT TATACAAGTG GAATCGACTG GAACAAGAAA ATTTGGTGGC
AGTGGTCTCG GTTTGGCGAT CGTTAAGCAA TTATTGCATT TGCTTAATGG GTCGATTACG
GTTGTTAGCT CACCGGGTTT AGGGACGTCA TTTACGATTA GGCTTCCTGT TGAAGTGATC
GAGTATAAAA AAGAACTGCC TTTAGCCGCT TCAAGTCATA ATGAATATTT ATTGCCAACA
AATTTGAAAG TATTATTGGT AGAAGATAAT AAATCTAATG CGTATATCGC AAAAGCATAC
TGTCAAAAAT ACAGCTTAGA TGTAACGTGG GTAACTTCTG CGGCTGAAGG GATTCAAATG
ATTAAAGAAC ACTCATTTGA TTTGGTTTTG ATGGATAATC AAATGCCAGA AATGAGTGGG
ATAGAAGCCA CAAGATACAT AAGAAAAATA CTTAATTTGA GTCTGCCAAT TTATGCTTAT
ACTGCAGATG TTTTAGAAGA CGCGACAAAC GAATTCTTAT CTGCAGGTGC GGATTACATT
ATAACTAAGC CAATTAAAGA AAAATCGATT TTAGATGCTT TGGTTTTTTA TAAAGCAGAG
CTAAAACGGA AAAATTAA
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| Protein sequence | MNDKRKVLKK ASLADLIFRA IFIIFSILTV GITIHTYQLS VNTINEEVKR NLEQTSALLE
NYFNHRLAIL QIRQDTDAGS LGLTDHYGNG RILNLEQYFS DIEAKEPSNS PDFRFLEANN
HVFWSDDNHL FLGMNSENLK YIIDKNIYIN TWYYLTVTTD EKITHLLIRR TPVVSSFTGE
VRSYLYNAAI LNNNISFVHS LKRVSRSQEI FIVNNKKLIS STIKKSTPRY AEVEKCIGNG
VDTFSGKILN YTPLKIKSLN GSLSIVSLKN KENVTLLEQR FIYSVVLSFF VLIAIAVLVR
GLFEHRILLA LNALLSYAKS VSKKNGNKHY LGSGILEFDQ IGAKLEGIFI ELIEAKEESH
KAQAAAEKLT LVKSDFLARM SHEIRTPLNG ILGISGLLKQ AQLPLEQKKQ IQIIHQGGEH
LLAVLNDILD FSQIEQDKLN INFEEFVLDD VLDTINAIYT PLCMEKNITF NLNNNIDNNV
ILYTDKVRLT QILFNLLSNG VKFTEIGQVT LSLNLESKNG QIFLCFDVED TGVGIDIENQ
ASVFDPFIQV ESTGTRKFGG SGLGLAIVKQ LLHLLNGSIT VVSSPGLGTS FTIRLPVEVI
EYKKELPLAA SSHNEYLLPT NLKVLLVEDN KSNAYIAKAY CQKYSLDVTW VTSAAEGIQM
IKEHSFDLVL MDNQMPEMSG IEATRYIRKI LNLSLPIYAY TADVLEDATN EFLSAGADYI
ITKPIKEKSI LDALVFYKAE LKRKN
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