| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VSAL_I0350 |
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| Symbol | thiP |
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| ID | 6989276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Aliivibrio salmonicida LFI1238 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011312 |
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| Strand | + |
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| Start bp | 381775 |
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| End bp | 383397 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643378729 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_002261882 |
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| Protein GI | 209693954 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGA ATCCCTTAAA TTCTATTCCC TATATCGGCT ATATGATCGC TACTGTGATT
GTTATTTTTG TTGGCGGAGC TATTGGTGCA TTATTAATCG CGTCACCCAG TATCAATGTC
AGTTTAATTT GGTCCGATCC TTATTATATT CATATAACCA AATTTAGTTT TTATCAAGCA
ACCCTGTCTA CGTTGTTTAG TGTGGTACTT GCGGTTCCGA CAGCATATGC ACTATCTCGT
CGCTCTTTTT TAGGACGCGG TCTGTTATTA AAGTTGTGTG CGACGACCTT GGTTTTACCT
GTGTTAGTAG GGGTTTTTGG TTTACTTGCT ATTTATGGAA ACAGCGGTCT CTTAGCTAAG
GTGTTTGCAT TTTTTGGTGG TAAATTGCCG TTTTCTATTT ATGGATTAAA TGGCATTTTA
CTCGCGCATG TGTTCTTTAA TTATCCTTTT GCAACTCGTT TGTTTTTACA ATCATTAGAC
AGTATACCGA TGGAGCAACA TCAGCTTTCT GCTCATCTAG GATTGACTGG ATGGAATAAA
TTTAACGTTG TTGCATGGCC AAGAGTAAAA CAACAATTTC CGCATGTTGC AGGCTTGGTG
TTCATGCTTT GCTTTACCAG TTTTGCAACC GTAATGGCAT TAGGTGGAGG ACCAAAATCA
ACCACGATTG AACTTGCTAT TTACCAAGCC ATTAAATTTG ATTTTGATTT ACAGGCCGGC
GCTATTTTAG CGTTATGGCA AATGTTGTTA TGCGCAGGAT TATCGCTGTG TATTCAACGG
TTTTCTACGT CGATTGCCGT TGACAGTGCA ACGCTAGGTA AGCCCATTAT CTATCAAGAC
TCAAAGAGAC AAAAGTTGTG GGATAAAGGG TGGATCATAT TACTTACTCT GTTTATTTTA
CCTCCATTAC TCATGGTTGT TATTAGTGGG ATAAATTCTG AAGTTATTAC GGTGATGACC
TCTAGTGCTT TTTGGTCAGC ATTCGCTAAT TCATTCATTG TTGCTTTCTG TGCGGCGCTA
TTAGCGATGG TTTTTGGGGT TTTATTGCTT CATACCACTC GAGCGTTAAG GCTTAATCAT
CAGCGTTTTT TGGCGGATAA ATTAGATTTA ATTGGTACGA TGATTTTAGT TACCCCAGGA
TTGGTTATTA GCACGGGGTT GTTTTTGTTG CTTAGAAACA TCACTGATGT ATTTAGTATG
GCTATTTGGA TCGTCATTTT AGTCAATGCA CTTATGGCGC TTCCATACGT CATAAAGACG
CTTGCTCAAC CTTTATTGCA TATGGCACAG CAATATCAGT TATTGTGTGC GAGTTTAGGA
CTTAATGGTT TTACTCGTTT TCGCTTAATT GAATGGAGAG GGTTAAGAAA ACCGATGGCT
CATGCCTTTG CCTTTGCCTT TGCCATTGCT TTTATCTTAT CAATGGGTGA TTTAAGTGCG
ATAGCGCTTT TTGGTAGTCA GGATTTTAGG ACATTGCCGC TATATTTATT TCAATTATTA
GGCAGTTATC AAATGGAAGC GGCTGCGGTG GTTTCACTTT GTTTACTCTT ATTAAGTGTG
GGTGTGTTTA GTACGGTTGA ATGGCTTTTT TCATCAAAGA ATCTACAAAG AGAGAATGTG
TAA
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| Protein sequence | MKTNPLNSIP YIGYMIATVI VIFVGGAIGA LLIASPSINV SLIWSDPYYI HITKFSFYQA
TLSTLFSVVL AVPTAYALSR RSFLGRGLLL KLCATTLVLP VLVGVFGLLA IYGNSGLLAK
VFAFFGGKLP FSIYGLNGIL LAHVFFNYPF ATRLFLQSLD SIPMEQHQLS AHLGLTGWNK
FNVVAWPRVK QQFPHVAGLV FMLCFTSFAT VMALGGGPKS TTIELAIYQA IKFDFDLQAG
AILALWQMLL CAGLSLCIQR FSTSIAVDSA TLGKPIIYQD SKRQKLWDKG WIILLTLFIL
PPLLMVVISG INSEVITVMT SSAFWSAFAN SFIVAFCAAL LAMVFGVLLL HTTRALRLNH
QRFLADKLDL IGTMILVTPG LVISTGLFLL LRNITDVFSM AIWIVILVNA LMALPYVIKT
LAQPLLHMAQ QYQLLCASLG LNGFTRFRLI EWRGLRKPMA HAFAFAFAIA FILSMGDLSA
IALFGSQDFR TLPLYLFQLL GSYQMEAAAV VSLCLLLLSV GVFSTVEWLF SSKNLQRENV
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