| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_p08174 |
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| Symbol | |
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| ID | 5552762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009777 |
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| Strand | + |
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| Start bp | 8437 |
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| End bp | 11370 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640898051 |
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| Product | relaxase NikB |
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| Protein accession | YP_001436041 |
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| Protein GI | 156936690 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGTTC GAGTTCGTGG TGGTAAGGAT GGCATTGCAG AGTATTTGCG CGATGGGATG
AAGTCCGATC GCGAAATGCA CCGTGACCAA TTAGATAAAC GTATTTGTAT TGATGGCGAT
TTATCTATTA CCGATACCAT TATTAAAACA ATGGCGAAAA CAGATAAACC TGAAAATTAT
TTTCATGTCA CTTTGAGCTT TGCTGAAAGG GATATTTCAG AAGAAAAGAT TCGTGAAGTA
TATGAGGAAT ATAAGCGAAA TATTATGTCT TCTTACACAG AGGAAGAATT TAATATTTAC
GCTGAAATTC ATGTTCCAAA AATTAAGTCC TACGAAGATA AGAGTACAGG GGAAGTAGTA
GAGCGCTTTC CTCATGTTCA TGTTGTAATA CCTAAGAAAA ATCTACTCGA TGATAAAAAC
CTGAATCCTT ATGGTTTCTA CAAAACAAAC TTGGAATATT TTGACGCTAT CCAAGAGCGT
ATTAATTCAA AGTTTAACTT GGTATCACCA TTTGATAATC AGCGTGTATT TAAAATCGAT
CAGTCGAAAC TATTAGCGCG TTACAAAGGT GACAACTTCA AAGGTGCGAA CGCCAAACTC
AAGTCTGAGC TGTTTGACGT TATCCAAGAC AAAAACATCA CCACTATGGC CGCTTTCAAA
GAAGAGCTCG CGAAGCATGG TGAAGTCTCG ATAGGCAAGG TCGGAAAGCC GGATGAATAC
CTCAAAATTA AACCTCATGA CTCAACGCGT AATGTTCGTT TAACGGACAG TTGTTTTCGC
CCTGAGTTTA TCGAGCATCG AACACTTAAA CGAGAAAAGC CGAGCGAAAA GCAAGTGAAC
CGCTTGGTTA ATGAGTGGGT CAACAGCAAG TCACATGAGG TTAAGTACAT TCACCAAGCA
GCTCCCAAAT TGCGCGAGCA ATACAAAGCG CTGCCAACCC AACTAAAAGG GGAGTTTTTA
AATGAGCAAC GAGAGCGATA TTACCGACAA TACAACCTTA GCACCGGAGC CCGACTTTCT
GAACGAAGCA CCGGAACCGG ACTTTCAGAA CGAGGCGCCG GAGCAAGCCA GCGGAATATT
TCAACGAGCA GACGGGCGCG TGATCGAAAG CTTGGTGTTG AACGAGGCAT CCCAAGAGGA
TTTACCGACA TCCCCAACGG CTTGCCAAGT ATGTCCGAAC TCAATGTGGC TACAGCAGGA
CGAAAACGGG GAAGTCGTCC TACAGAACTA TTGCATGATA ATGCATCGGA TCATTTGGCA
GTCAAACAAA CCAGTCGAAG TCCTCAATTG CGACGGGCTG GTTATGAACC TCGACGAAGA
GTAGTTCGAC TTTCGGTTTA CCGAAAGCCT TCCCCGAACG CGACACTGGC AACTATCAAG
CGCATCAAAG CCAAGGCGCA ACATAGCGAG AGCTACGTGA CGCAATTGTT CGACTCCTTT
CAAGAAAATA AGCAAGAGCA AAGCGAACTC GGTCGCTTTC GCACTATCAG GCAAAATCTA
AAGGCCGAGA GCCTGCTTTC TCACCTTTCC GACTCTCATG GCTTAGTCAA AGACCAGTAC
AGCCACTTTA AGGCCAAAGA TGGCTCTGTG CGGATAAAAG CTGAAACGCG AGCTTATAAC
GTCAGTGACT TTTGCACGAA ATACATGGGG CTGAGTTGGG GTGAAACCAA AGAAATTTTA
AAGACGACTT ACGGCAAGCA GAGGCAGCAA CTCGCGCAAC AGCAACGAGT TCGCCAAGAG
CAGCAAGCCG TCAATTCCAT CGTGTTTGTC AGCAATAGAG TTACTCAGGG TTGGGGTAAA
AAGAACCCGC TCGATGAGTC CATCCGATTG CTCAAACACT TGCAACGCAA AGAGCACATT
GGAGAGCTAC CTATGGCACT ACATGAACTA GAGCGCCACC GCGCACCAGA AACAAAAGAC
AATGCTATCG TTTCAGCTAA CGAAAGCTTT AGCGCCGTCG AGAACGCTAA GCGCATCATG
AAAGCGAGAG ATACTGCTGC GCAGATCACG TTGACCATGA ACGACCTAGT CGCGAGCAAG
AACGACACAA AACGTTATGT GGACTTCTCT GACAAGAACA CAGGAGACAA AGTATTTCGT
GATGACGGTG AAAAGATCGT TATGCACAGC AAACAAGCGG ACATTAACCA TACCGCAGCG
GCGCTGACGC TGGCCGCCGA AAAGTTTGGG GTGGTGAAAA TCAATGGTAC GAAGGAGTTT
AAAGATCAAG TCATCGATGT GGCTGTGAGC AAGGACTTAA ACATTGTGTT TGCAGACAAG
AAGATGGAAG CGGACTTTGT TCGTCGGAAG GAAGAGCTTA AGCAATCTGT CTCACTAGAA
AGTGTTAGCC AGAATCTGGC AACAAATAAT CAAGCGACAA CCACCACGCC AAAATCGACG
GTTACTGACA CCATTGCGAT AGAAATGGAA GATGGACGCC AATATGAGTT GACTCGCACT
GCTGAGCCAG AGACAGAAAC CAGAAGAGCA AAGGCAGGGG CATGGACGTT TGCTGATCCT
CAAAATGCAT TACCTAAGTC AATTCATAAA AATATCCCTT CGGGTGTTGG TGAAGGCGAT
AAAATCGAAA CTGAATTTGG GAAAGCTAAA GTAACAAAAG CTGATATATT GTCGCAGCAA
GAACCAAAGC TTCAGCCTAC CAAGTTTGAA GTTGAATATC AGTGGGATAA GCTCAGTGGT
AAGCTGCAAG TGACGATTAA CGGAGAGTCG CCAAACCGTT TTGAAAAATC CACGGTCGAG
CAAATTATGA AGAAAGATGC TTTTTTGAAA AACTACACCG TTAAGGAGGT GAAGTTTGGT
TTAATAGACC AAAAGAAAGC GGAAGGCGTT CAACCTGTGC CTAAGACGTA TGATGCTCAA
GCTAACGTTA TCGATAAAAT CAGCGAGCAA AAACAAAGTC ATCGCATGAA ATAG
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| Protein sequence | MLVRVRGGKD GIAEYLRDGM KSDREMHRDQ LDKRICIDGD LSITDTIIKT MAKTDKPENY
FHVTLSFAER DISEEKIREV YEEYKRNIMS SYTEEEFNIY AEIHVPKIKS YEDKSTGEVV
ERFPHVHVVI PKKNLLDDKN LNPYGFYKTN LEYFDAIQER INSKFNLVSP FDNQRVFKID
QSKLLARYKG DNFKGANAKL KSELFDVIQD KNITTMAAFK EELAKHGEVS IGKVGKPDEY
LKIKPHDSTR NVRLTDSCFR PEFIEHRTLK REKPSEKQVN RLVNEWVNSK SHEVKYIHQA
APKLREQYKA LPTQLKGEFL NEQRERYYRQ YNLSTGARLS ERSTGTGLSE RGAGASQRNI
STSRRARDRK LGVERGIPRG FTDIPNGLPS MSELNVATAG RKRGSRPTEL LHDNASDHLA
VKQTSRSPQL RRAGYEPRRR VVRLSVYRKP SPNATLATIK RIKAKAQHSE SYVTQLFDSF
QENKQEQSEL GRFRTIRQNL KAESLLSHLS DSHGLVKDQY SHFKAKDGSV RIKAETRAYN
VSDFCTKYMG LSWGETKEIL KTTYGKQRQQ LAQQQRVRQE QQAVNSIVFV SNRVTQGWGK
KNPLDESIRL LKHLQRKEHI GELPMALHEL ERHRAPETKD NAIVSANESF SAVENAKRIM
KARDTAAQIT LTMNDLVASK NDTKRYVDFS DKNTGDKVFR DDGEKIVMHS KQADINHTAA
ALTLAAEKFG VVKINGTKEF KDQVIDVAVS KDLNIVFADK KMEADFVRRK EELKQSVSLE
SVSQNLATNN QATTTTPKST VTDTIAIEME DGRQYELTRT AEPETETRRA KAGAWTFADP
QNALPKSIHK NIPSGVGEGD KIETEFGKAK VTKADILSQQ EPKLQPTKFE VEYQWDKLSG
KLQVTINGES PNRFEKSTVE QIMKKDAFLK NYTVKEVKFG LIDQKKAEGV QPVPKTYDAQ
ANVIDKISEQ KQSHRMK
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