Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_05611 |
Symbol | |
ID | 5557734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | + |
Start bp | 814210 |
End bp | 814824 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640910087 |
Product | hypothetical protein |
Protein accession | YP_001447741 |
Protein GI | 156976835 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATACCG TTGGCATTGT ATTGTTTGAT GATTTCACTG ACGTAGACTT TTTCTTGATG TATGACCTGT TGGGAAGAAC CCAAGACAGT TGGACCGTCA AAGTGTTAGG AACCAAGCCA GAACATATTT CTCACCTAGG TATGGCGGTA AAAACGGATG GTCATATCTC TGAAGTTGCA GCACAAGACG TGGTACTAAT ATCAAGCGGT AAGAAAGGGA TCCCAGCTGC ACTCCAAGAT AGAGAGTTTA TGTCGGCAAT GAAGCTTGCC CCTGAAAAAC AACTGATTGG CTCGATTTGC GCTGGCTCTT TTATCTTGCA TGAATTGGGT TTACTTGATG GTAAACAGCT CACAACAAAC CCAGATGCGA AACCAGCATT GGAAAGCATG GGAGGGGATG TTCAAGATGT TCCTCTCGTT GTAGAAGGCA ATATTGCAAC AGCAGGTGGT TGCTTATCGC TCATGTATCT CATTGGTTGG CTAGCAGAGC GTCTGTTTGA TTCAGATAAG CGACGCGAAA TTCAAAACCA GTTGATACCC GCTGGCCAGT TAGAGCACTT TGAGTTGTTG ATATCTAAAA CAATCGCGGA TGCGGAGCAG AAAAATCGCT CTTAG
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Protein sequence | MYTVGIVLFD DFTDVDFFLM YDLLGRTQDS WTVKVLGTKP EHISHLGMAV KTDGHISEVA AQDVVLISSG KKGIPAALQD REFMSAMKLA PEKQLIGSIC AGSFILHELG LLDGKQLTTN PDAKPALESM GGDVQDVPLV VEGNIATAGG CLSLMYLIGW LAERLFDSDK RREIQNQLIP AGQLEHFELL ISKTIADAEQ KNRS
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