Gene VIBHAR_05164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_05164 
Symbol 
ID5557259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp416830 
End bp417735 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID640909641 
Producthypothetical protein 
Protein accessionYP_001447297 
Protein GI156976391 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGA CGATTCGTTT GTTAAGCGGA ATGATCGCAG GAGCAATGTT GGCAGGTTGC 
TCGGCAGATG CGTATGTTAG CCAAGAGAAC CGAGAAAAGT TTGCCGATGT CAATGTCTCC
AAGTTTTTGA TCAGTGAATG TTTAGCGCCG CAACGTGAAA TCCATTTTGC GGTTGCCGAG
CATTTCGATT TCGATAAATC TTTCATTCGT GAAGCCGATG CGGTAAGCCT AGATGTGTTC
ATCCGCAATA TTCAAGGCTT GAGCGGGCGC ATCACGATTG TTGGTCACAC TGATTTTAAA
GGCTCTGATG AATATAACGA TAAGCTGTCT ATGCGCCGAG CTGAATCGGT AGAGGCGTAT
CTCCAGCAAC AACTCGATCC AGAGCAATAC GATTGGGAAG TGAAGCACTT TGGTGAGTCG
CAGCCGCTAG CGTTGGGTAA ATCAGATCAA GATCGTGCCG AAAACCGTCG TGCTTACGTG
ATGTTTGAAG AGGCGCAGAA GTACGAAGAG ATGCCTTTCT GTGAGCCGCC AAAACCAGAA
CGTAAGATCT ACATGGCGAT GACACCACAC TTTGATTTCG ATAAGTCGGA ATTAAAACCG
GAAGACCTTT CACAATTAGA TGATTTCATC GCAAAACTGC AAGGTTTAGA AGGGAGCATT
ATGGTGGCTG GTCATACCGA CCAAGTCGGT TCGCTCTCTT ATAATGAACA ATTGGCGGAA
CGAAGAGCGC AAACCGTGGT GGCGTATCTC AAGACGAAAC TCGATCCATC GCAGTTTGTG
TGGGAAGTAA AAGCCTTTGG TGAGCTTCAA CCTGTGATCA ACGAAGAATC TCCAGAAGCC
AATGCTTTAA ACCGCCGTGC GTTTATCGTA TTTAAAGAGA GCGAACTGGG GCAACCGACT
GAATAA
 
Protein sequence
MKTTIRLLSG MIAGAMLAGC SADAYVSQEN REKFADVNVS KFLISECLAP QREIHFAVAE 
HFDFDKSFIR EADAVSLDVF IRNIQGLSGR ITIVGHTDFK GSDEYNDKLS MRRAESVEAY
LQQQLDPEQY DWEVKHFGES QPLALGKSDQ DRAENRRAYV MFEEAQKYEE MPFCEPPKPE
RKIYMAMTPH FDFDKSELKP EDLSQLDDFI AKLQGLEGSI MVAGHTDQVG SLSYNEQLAE
RRAQTVVAYL KTKLDPSQFV WEVKAFGELQ PVINEESPEA NALNRRAFIV FKESELGQPT
E