Gene VIBHAR_04797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_04797 
Symbol 
ID5556706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009784 
Strand
Start bp60799 
End bp61791 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content47% 
IMG OID640909276 
Producthypothetical protein 
Protein accessionYP_001446933 
Protein GI156976027 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATTACA AAAATACGAT TTTGTTCGCG CTGTCTGTAT TCGCGCTTAC TCCGGCTTTT 
GCCCAAGAGG CTCAGCAAGC CGAGGAACCT GAGAAAGGCG TAATCGATAG CCTAGTATCA
AATGGTTTGT ACTTTCAAAT AGGAGGAGGG CTTGCCCAGT TTCAGGACGA ACAGTACAAA
CACGATAACA ACATCACCAG TTTGAAATAC AGTTTGGGTA TCACGACAGA ACCTTTAGAT
TATGAGATAG CTTATCGCAG CTTATCGGAC GGCAATGGCT TTGACATGAA AGGCTTGGAT
ATTCTCGCCA AACACAAATG GTCATTATGG CGCGATGGCG GCTTATTTGC TGGTGTGGGT
GGTTACGTCT ACAACGCAGA CATGGATAAA CCTCAGTTGG AATCACCGAC AGAAACCAGT
GGTGTGGCAC CGTATCTATC GGTGGGCGGT TACTATGCTC TGAGTGAGTT TATTGATGTT
TCTGTCCAAT TCGACAATTT ATTCAATGTG AGTGTGCTCG ATCAGAACTA TGACAAGAAA
GACACCAAGC AGTTGCGCCA GGTGAATTTG TCTCTGGTGT TGCATCCATG GTCAAGCAGC
AGCTATGACC CTCAACCAAT CGAGCAAATA GAAGACGCAC CTGAAGAGCA AACCGTGATT
CTCGCTGAGA ACAGTCCGGT TTACAGCTAC GATGACGCAT CATTGAATCT GCAAATGGAA
ACGCAACTGA TGCAAATGGC AAGTCGCATT GCTGAACTGG AAAGTTACGA AGTGGTGGTA
ACTGGAGGAG CCGATAGTAA GCCTGCGTAT TTGGAGCACA ATACTCGTTT AGCAGAAGAG
CGAGCGAAAG TGGTCGCTGA CTTCTTGATT TTACATGGCG TGAAAGCGGA GAACATTCGT
CTTGAGACGT CTGTCATCGA ACAAGAGCGC AGTGTACAAG ACGCGCGGAA AGTGGAAGTG
ATGGTGAACG GAACCGAATT GGTTTCACCG TAA
 
Protein sequence
MNYKNTILFA LSVFALTPAF AQEAQQAEEP EKGVIDSLVS NGLYFQIGGG LAQFQDEQYK 
HDNNITSLKY SLGITTEPLD YEIAYRSLSD GNGFDMKGLD ILAKHKWSLW RDGGLFAGVG
GYVYNADMDK PQLESPTETS GVAPYLSVGG YYALSEFIDV SVQFDNLFNV SVLDQNYDKK
DTKQLRQVNL SLVLHPWSSS SYDPQPIEQI EDAPEEQTVI LAENSPVYSY DDASLNLQME
TQLMQMASRI AELESYEVVV TGGADSKPAY LEHNTRLAEE RAKVVADFLI LHGVKAENIR
LETSVIEQER SVQDARKVEV MVNGTELVSP