| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_03688 |
|---|
| Symbol | |
|---|
| ID | 5555823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio harveyi ATCC BAA-1116 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009783 |
|---|
| Strand | - |
|---|
| Start bp | 3726122 |
|---|
| End bp | 3726835 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640909167 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001446829 |
|---|
| Protein GI | 156975922 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4966] Tfp pilus assembly protein PilW |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTC GTGGTTTCAC CTTAATGGAA ATGATCGTCA CCATCGTAAT TGGTAGCTTC
ATCATGCTTG GTATTGCGGG TTACGTGCAG TTAGGCATGA AGGGGTACGC AGACACGATT
GATCGCCAAC GAATGCAAAC GCAAGCGCAG TTTGTATTAG AAAAAATGTC TCGTGAAATT
CGTCACGCAG TCCCAAACAG CTTTCATGTC CCTACCGGAA CTACCAATTG CTTGGAATTT
GTGCCGATTG AGTATTCAGG CTTTTATACT CTGACGAATA ATGACTTGGA GTTTTTACTC
GGCAATGACT CTACGCTAAA CCCCATGCCT GCTAACCGTT GGATGGTGAT TAACCCAAGT
CGCTACGAAG ACTTACAATC TGCCTCTCCA CAGAGTTTAG CGGTCGGTGG TTTAGCCAAA
ACTGGCGATG TTTTTGTCGT CAGTGGTGCA GCAAGTACGA TTGGTGGTAC TTCCATTTCT
AGCCGTCATT ACATCTACCA GAACAATTCA GAAGTTCGCT ATTGTTTCGA CAACAAGCGC
GTCACGCGTA ATGGCATTAC GGTTGCGGAC AGTGTCGATA CTTCGACGAG TGATATGCAC
TACCTCGAGC CAACACTTCA ACGTGGCGGT ATCGTGCATA TCAACTTAGA GTTCACTCAA
AACGGGGAGC GTAGTGTTTA CCAACAAGAC GTGCAGGTGC TCAATGTTCC GTAA
|
|---|
| Protein sequence | MKTRGFTLME MIVTIVIGSF IMLGIAGYVQ LGMKGYADTI DRQRMQTQAQ FVLEKMSREI
RHAVPNSFHV PTGTTNCLEF VPIEYSGFYT LTNNDLEFLL GNDSTLNPMP ANRWMVINPS
RYEDLQSASP QSLAVGGLAK TGDVFVVSGA ASTIGGTSIS SRHYIYQNNS EVRYCFDNKR
VTRNGITVAD SVDTSTSDMH YLEPTLQRGG IVHINLEFTQ NGERSVYQQD VQVLNVP
|
|---|
| |