Gene VIBHAR_02539 details

Gene Information

• Locus tag: VIBHAR_02539
• ID: 5555727
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio harveyi ATCC BAA-1116
• Kingdom: Bacteria
• Replicon accession: NC_009783
• Strand: -
• Start bp: 2562954
• End bp: 2563664
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640908024
• Product: hypothetical protein
• Protein accession: YP_001445727
• Protein GI: 156974820
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1180] Pyruvate-formate lyase-activating enzyme

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGAGT GTCCGGTTGG CGCGCTGAAG TTCGACGAAA GCAACAACGT TGTTTGGCTT 
AAAGAGGAGT GCACCCACTG CGATCGTTGT ACAGAGATAT GTCAGCACCA ATCTAATCCA 
AAAATTACTG ACTACTCTGT GGAGGCAATG CTCGATTTGA TACGCAAACA GCGCTTTTTT 
ATTAGCGGTG TTACTGTATC CGGTGGGGAA TCTACCTTAC AGCTTCCTTT CATTACTGCG 
CTATTTAAAG GGATCAAACA CGATCCTGAA TTACAGCATC TCACTTGTTT CATCGATAGC 
AATGGGTCTT TATCAACCTC GGGTTGGGAA AGAGTGTTGC CGTATATGGA TGGGGCGATG 
ATCGACCTCA AATCTTGGCA AAGCGAAACG CACCACTGGT TGGTCGGACG TGACAATCAT 
CGTGTGTTTC AAACCATTCA ATACCTGGCG CAAGTAGACA AGCTTTATGA AGTGCGATTA 
CTGCATATTC CCGGAAAAAG TGATTTAGAT ACTGAGGTCA TGATGGTGGG GCATTATCTG 
CAAGCGTTGC CAGAATCAGT CAACATTCGC CTGAACGCGT TTCAACATCA CGGCGTGGTT 
GGTGAGGCGC AAGAATGGGA GAAATGTTCT AAGGGTGAAA TGGAACGCTT TCACGCTCGA 
TTAAGTCAGT TTGTCAGCAG ACCAATGACC ATGCCATCGG TCTACGTGTA G 

 

Protein sequence

MSECPVGALK FDESNNVVWL KEECTHCDRC TEICQHQSNP KITDYSVEAM LDLIRKQRFF 
ISGVTVSGGE STLQLPFITA LFKGIKHDPE LQHLTCFIDS NGSLSTSGWE RVLPYMDGAM 
IDLKSWQSET HHWLVGRDNH RVFQTIQYLA QVDKLYEVRL LHIPGKSDLD TEVMMVGHYL 
QALPESVNIR LNAFQHHGVV GEAQEWEKCS KGEMERFHAR LSQFVSRPMT MPSVYV