Gene VIBHAR_00608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_00608 
Symbol 
ID5554631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp593402 
End bp594412 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content47% 
IMG OID640906103 
Productgeneral secretion pathway protein K 
Protein accessionYP_001443837 
Protein GI156972930 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAGTC GTCAACGTGG GGTCGCGCTC CTTATCGTGC TGATGTTACT TGCCATCATG 
ACCACGGTAG CCGCAAGCAT GTCAGAGCGA TTGTTTCTGC AGTTTCAGCG TGGCTCGAAT
CAAATTAATT ACCAACAAGC TTACTGGTAT AGCTTAGGGG TAGAAGCGTT GGCTGAGATT
GGTATCGAAC AGAGCTATGA AGACGACGAT AACATCAACT TAAGTCAGCC TTGGGCGATA
AAAGAGCAGG TCTACCCGTT GGATTATGGT CAAGCCGCTG GCCGCATCAT TGATAAACAA
GCCTGCTTCA ATTTGAATGT GTTAGCGAGT GTACAACCCT CCGGGGATTC GACAAATCGT
CCATACTTAG TACAAGTCTT CCAACGATTG ATGGAAGAGA AAGACGTTGA ACCTTATCAA
GCTGAAGTGA TTGCAGACTC TACTTGGGAA TATGTCGATA GTGACAGCAC GGTACGTTCT
ACGGCTGGTG TTGAAGACAG CACTTATGAA GCAATGAAAC CGCAATACTT ACCACCAAAT
GGTTGGATGG CGGATGCGAG TGAGTTACGT GCGGTTTACC AAGTGAGTGG CGATACCTAC
CAGAAGATAG CCCCAATGGT TTGTGCGCTT CCAAGCGATG ATTGGCGTTT GAACGTAAAC
ACAATTGACG TTGAACAAGC GCCTATTTTG GTGGCAATGT TTACGCCGGG CCTTAGCAGC
AGCGATGCGG TGCAATTGAT AGAAAAGCGT CCTTTTGATG GTTGGGACAG CGTAGATGAA
TTTTTGTCTG AGTCAGAATT AGCTGGCTTA AGCGATGACG TAAAGAAAAA TGCCAAAGGT
TACTTAGGAG TCGACAGCGC TTTCTTTGAG CTGGATGTTC AAGTACTGGT GGATGAATCC
CGAGTACGCC TCCGTAGCCT TTTACAAAGT ACAGATAGAG AAACGGTGAC TGTCGTTCGC
CGTCGTTTTG GAGGAATCAG TGAGCGAGTT TCTGACCGTT CGGCTGAGTA G
 
Protein sequence
MASRQRGVAL LIVLMLLAIM TTVAASMSER LFLQFQRGSN QINYQQAYWY SLGVEALAEI 
GIEQSYEDDD NINLSQPWAI KEQVYPLDYG QAAGRIIDKQ ACFNLNVLAS VQPSGDSTNR
PYLVQVFQRL MEEKDVEPYQ AEVIADSTWE YVDSDSTVRS TAGVEDSTYE AMKPQYLPPN
GWMADASELR AVYQVSGDTY QKIAPMVCAL PSDDWRLNVN TIDVEQAPIL VAMFTPGLSS
SDAVQLIEKR PFDGWDSVDE FLSESELAGL SDDVKKNAKG YLGVDSAFFE LDVQVLVDES
RVRLRSLLQS TDRETVTVVR RRFGGISERV SDRSAE