Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_00560 |
Symbol | |
ID | 5554422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | - |
Start bp | 543334 |
End bp | 544242 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640906055 |
Product | permease |
Protein accession | YP_001443790 |
Protein GI | 156972883 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACGAGC GTCGCGCCCT AGGATTTGGG CTATCAGCGG TATTACTTTG GTCAACAGTA GCGACCGCAT TTAAATTGAC TTTGGCGGAA TTCACACCGA TTCAGATGCT GACCATGGCG AGTATTGTCT CGGCCATCGC ACTCATCATG ATATGTGGTG TACAGGGGAA GTTGAATCAG CTCAGCTCGA CATTCCTTTC CAACCCTTGG TACTACTTAC TACTTGGGCT GATTAACCCG CTAGCGTACT ACCTTATTCT GTTTAAAGCC TACGACTTAC TGCCAGCCTC TCAAGCGCAG GCAATCAACT ACAGCTGGGC GATCACACTC ACCTTAATGG CAGCGGTTTT CTTAGGTCAG AAGATCCGCA GCAAAGACTG GATTGCTTGT GGTTTCAGTT ACTTGGGCGT TATCGTGATT GCCACCAAAG GCAATGTGTT GGGAATGGAG TTCGAAAGCC CACTTGGTGT CGGGCTAGCG CTGCTTTCTA CACTGCTGTG GGCAAGTTAC TGGATTCTCA ACACCAAAAA CAAAGCCGAC CCTGTAGTGG GCGTACTATT GGGTTTTCTG GTGGCGATTC CCTTTGCGAT TGGCTTAAGC ATTTACGAAG GCGCAAATTG GAGCCAAATC ACCGCAAAAG GTTGGGCGGC AGTGACCTAT GTTGGTCTGT TTGAGATGGG CGTAACCTTC GTGTTATGGC TATCTGCACT GAAGTTAACC GAGAACACAG CGCGCATCAG CAATCTGATT TTTGCTTCAC CGTTCATCTC ACTCATGCTG CTTTCTACTA TCATTGGCGA AGAGATTCAT CCATCCACTT TGATTGGCTT GGTGCTGATC ATCAGCGGTT TGGTCATACA ACAAGTGAAG TTTGGCAAGC AGCAAAAACA GGCAAACAAC GCTCAGTAA
|
Protein sequence | MNERRALGFG LSAVLLWSTV ATAFKLTLAE FTPIQMLTMA SIVSAIALIM ICGVQGKLNQ LSSTFLSNPW YYLLLGLINP LAYYLILFKA YDLLPASQAQ AINYSWAITL TLMAAVFLGQ KIRSKDWIAC GFSYLGVIVI ATKGNVLGME FESPLGVGLA LLSTLLWASY WILNTKNKAD PVVGVLLGFL VAIPFAIGLS IYEGANWSQI TAKGWAAVTY VGLFEMGVTF VLWLSALKLT ENTARISNLI FASPFISLML LSTIIGEEIH PSTLIGLVLI ISGLVIQQVK FGKQQKQANN AQ
|
| |