| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004396 |
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| Symbol | |
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| ID | 8558164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 3100478 |
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| End bp | 3101986 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646407525 |
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| Product | transglycosylase Slt family |
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| Protein accession | YP_003287019 |
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| Protein GI | 262395165 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGATAC CTAAGCTATG CGCAGTTATG CTGCTCTTAT TGTCTGCTTC CGTTTGCGCA
CTGCAAATAT CACCACTCAA GCAACCTCCT TACACTGGGG ACCTCGATGT TATTAAAGAG
AAGAATGTTT TACGTGTTCT CGTTTCTGCT GATCTAGGCT TCTATTACAT TGAGGGCGGC
ACACCAAAAG GAATAGGTGC AGAACTGCTG GCGCATTTCG AAAAAGACCT TCGTAAGCTC
AAACCGAAAC TTAACGTACA AATTATTCCT CTAGCCCGTG ACCAACTTCT GCCAGCCTTA
GAAAATGGCT CCGGTGATCT AGTCGTCGCC AATCTGACCA TTACCAACTC ACGTAAACAG
AAAGTCGATT TTAGTTCACC CATTCTTACT GGTATTGACG AGTGGATAGT CACGAACAAA
AACACACCAG CTATGACTAA CATTGAGCAA CTGAGCGGCA AAGAGGTTTG GGTACGTGCC
AGTTCTAGCT ACTTTGAGAG TATTCAAGCA CTAAATAAGA AGCTAAATAA AAAAGGCTTA
CCACCCGTTG TCGTACATTT TATTGAAGAA ACACTGCAAG ACTACGAACT GGTTGGGATG
CTCAATAACG GCTACGTCAA AGCCATTGTT CTCGATAGCC ATAAAGCCAA ACTTTGGCTG
AAAGTGATGG ATGATATTCG AGCTCACCCA GAAATTCCTA TTCGTGAAAA TGGTAAAATC
GCTTGGGCAA TGCGGGAAAA CAGCCCAAGT TTGAAAGCCG TCGTGAACAA GTTTATTCAG
AAATCTCGTT CTGGGACACT GCTCGGTAAC GTCATTTACG GAAAATACAT CGATAACACA
GGTTGGCTAA ACAAAGCCCT TAACCCCAAC AAAATTGCTC AACTAGAAAA GCTTGCTACG
TTGTTTTCAC GCTATGGCGA GAAGTACGAT ATCGACTATT TACTGATCGC AGCCGTCGCT
TATAAAGAGT CCGGCTTTAA TAACGACCTC GTTGGAAGTC GAGGTGCAGT CGGCATAATG
CAAGTTCTAC CCAGCACGGC TCGAGACCCT AATATCAATA TCAAAAACGT TCGACAGCTA
GAAAACAATA TTCATGCTGG CGTGAAGTAT TTAGCATTTT TGCGTAAGCA GTACTTCAGT
GATCCTGCTA TTACGGCGGA AAATAAACTC TACTTTACCT TAGCGGCTTA CAATGCTGGC
CCCGGGAATG TAGAACGAAT TCGTAAACGT GCAGCCCAGC AAGGCTACGA TCCTAATGTT
TGGTTCAATA ACGTGGAAGT CGTTATGCGG AAAAGTTTAA GCTCAACGGT TGGATACGTT
ACCAGTATTA ATCGCTATTA CGTTATATAC AAACAGCTAG AAAGTTTGGA CCAGGTCAAA
AGTCTAGAGC GGGTATCACT GGCTCCAAAG GATCCCGTAT TCATGATACC GCTACGAAAA
GTCAGTCAAA CGCCAGACAC AAAAAAGCCG CTTGTACAAA TAAGCGGCTT TGTAAATAAA
CTCGTCTGA
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| Protein sequence | MTIPKLCAVM LLLLSASVCA LQISPLKQPP YTGDLDVIKE KNVLRVLVSA DLGFYYIEGG
TPKGIGAELL AHFEKDLRKL KPKLNVQIIP LARDQLLPAL ENGSGDLVVA NLTITNSRKQ
KVDFSSPILT GIDEWIVTNK NTPAMTNIEQ LSGKEVWVRA SSSYFESIQA LNKKLNKKGL
PPVVVHFIEE TLQDYELVGM LNNGYVKAIV LDSHKAKLWL KVMDDIRAHP EIPIRENGKI
AWAMRENSPS LKAVVNKFIQ KSRSGTLLGN VIYGKYIDNT GWLNKALNPN KIAQLEKLAT
LFSRYGEKYD IDYLLIAAVA YKESGFNNDL VGSRGAVGIM QVLPSTARDP NINIKNVRQL
ENNIHAGVKY LAFLRKQYFS DPAITAENKL YFTLAAYNAG PGNVERIRKR AAQQGYDPNV
WFNNVEVVMR KSLSSTVGYV TSINRYYVIY KQLESLDQVK SLERVSLAPK DPVFMIPLRK
VSQTPDTKKP LVQISGFVNK LV
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