| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004235 |
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| Symbol | |
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| ID | 8557996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2913570 |
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| End bp | 2914994 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407357 |
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| Product | phosphotransferase system trehalose-specific IIBC component |
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| Protein accession | YP_003286858 |
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| Protein GI | 262395004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.712328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAGA TTGCGCGTAA AGACGTGGAG CGTCTTATTG AGCTGGTCGG GGGGCCGGAC
AATATTGCCA GTGTAAGCCA CTGTTTAACT CGCTTGCGTT TTGTTCTAAA CGATACGGAC
AAAGCAGACA CAAAACAGTT AGAAGCATTA CCGATGGTGA AGGGCTGCTT TACCAACGCA
GGTCAATTCC AAGTCGTCAT CGGCACTGAA GTTGATGAGG TTTACAAAGT ACTGATCGAG
CTAAGCGGTA AAAGTGAAGC GAGCAAAGAC GAATCCAAGA ATGCTGCTCG TCAAAATATG
AATATCGTTG AGCGTGGTAT TTCCCACCTT GCAGAAATCT TTGTACCACT GTTGCCTGCG
ATCATTACTG GTGGTTTGAT TCTTGGTTTC CGTAATGTGA TTGGCGACAT CAAAATGTTT
GATGGTCAAA CCCTAACGGA AATCAGTCAG TTTTGGGCGA CTGTTCATTC ATTCCTATGG
TTAATTGGTG AAGCAATTTT CTTCTTCCTA CCCGTTGGTG TGTGTTGGTC GACCGTGAAA
AAGCTCGGTG GTACACCGAT TCTGGGTATA ACGCTTGGTG TGACATTGGT TTCGCCGCAG
TTAATGAACG CCTACCTGAT TGGTAAGCAA GTACCTGAAG TGTGGGACTT TGGGTTGTTT
GCGATTGAGA AAGTCGGTTA CCAAGCGCAG GTGATTCCCG CGATGTTAGC AGGTATCGCA
CTAGCGTTTA TCGAAACACG CTTAAAACGC ATCATTCCAT CTTACCTTTA CCTAGTAGTA
GTACCGTTTG TTTCTATCAT TGTGTCTGTG ATTCTTGCGC ACTCTATCAT TGGCCCATTC
GGTCGTATGT TGGGTGACGG CGTTGCTTTC GCAGCAAAAG CAGCTATGAC GGGTGACTTC
GCGATGATTG GCTCAACCAT CTTCGGCTTC TTATACGCGC CACTTGTGAT AACAGGTATC
CACCACACAA CCAACGCCGT TGACTTGCAG TTGATGCAAG AATTGGGTGG CACGCCGATT
TGGCCTTTGA TTGCACTATC GAACATTGCT CAAGCATCGG CAGTGGTTGG CATCATTATC
ATCAGTAAAA AGCAGGATGA GCGTGAAATC TCAGTGCCAG CAGCGATTTC TGCCTACCTT
GGCGTAACAG AGCCGGCGAT GTACGGCATC AACTTGAAAT ACAAGTTCCC AATGTTGAGT
GCGATGATCG GTAGTGCATG TGCTGCTGCT ATCTGTGGTA GTGCGGGCGT CATGGCGAAC
GGTATCGGTG TGGGCGGCTT GCCGGGCATC TTATCTATCC AGCCGCAGTT CTGGGGCATC
TTTGCTCTGG CGATGTTGGT CGCGATGGTG GTACCCGCTG CATTAACGTT ACTTCTTTAT
AAGCGTGCAC AAGCGAAAGG TGAGCTTGAG GCGGCAAACG CGTAA
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| Protein sequence | MSKIARKDVE RLIELVGGPD NIASVSHCLT RLRFVLNDTD KADTKQLEAL PMVKGCFTNA
GQFQVVIGTE VDEVYKVLIE LSGKSEASKD ESKNAARQNM NIVERGISHL AEIFVPLLPA
IITGGLILGF RNVIGDIKMF DGQTLTEISQ FWATVHSFLW LIGEAIFFFL PVGVCWSTVK
KLGGTPILGI TLGVTLVSPQ LMNAYLIGKQ VPEVWDFGLF AIEKVGYQAQ VIPAMLAGIA
LAFIETRLKR IIPSYLYLVV VPFVSIIVSV ILAHSIIGPF GRMLGDGVAF AAKAAMTGDF
AMIGSTIFGF LYAPLVITGI HHTTNAVDLQ LMQELGGTPI WPLIALSNIA QASAVVGIII
ISKKQDEREI SVPAAISAYL GVTEPAMYGI NLKYKFPMLS AMIGSACAAA ICGSAGVMAN
GIGVGGLPGI LSIQPQFWGI FALAMLVAMV VPAALTLLLY KRAQAKGELE AANA
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