Gene VEA_003277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003277 
Symbol 
ID8557010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp1839042 
End bp1839668 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content43% 
IMG OID646406372 
Producthypothetical protein 
Protein accessionYP_003285902 
Protein GI262394048 
COG category[S] Function unknown 
COG ID[COG3575] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.921739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTGGT TTAAATGTTT AAGGTGGTAT GCGGAAGCTT CGGCATTGCG TTGCTCACAC 
CTTAACAGGG CGTTATGGCG CAGGGCGAAA ATGGATAAGA TCGTAGAACT AGTTAAACAA 
GATCCAATCA GAGTTGAGGC ACTCAATTGT GTTTCAGAGT TAGGTTTGCC GCAGTGCTAT 
ATAGCAGCAG GTTTCGTTCG AAATTTAGTT TGGGACTCAC TGCATGGTTT CAAAGTATCT 
ACTCCCTTGA ATGATGTGGA TGTAATCTAC TTTGACCCAA GCGAATCTAA CACCAATACC 
TATTTGGAGT ATGAAGCACA ACTAAAAGCC TGTATGCCAC AGCTTAACTG GCAAGTACGT 
AACCAAGCTA TAATGCACAA GCGTAATGGT GACAATCCTT ATAAAAGTTC AGTTGACGCA 
ATGAGTTACT GGCCTGAAAA AGAAACAGCG GTAGCAATTC GGCAAATTGG GCGAAACCAA 
TATGAATGTG TTGCTGCTTT TGGGTTTGAA TCCCTATATA GTTACTGGGT CACGTATAAT 
CCTAAAAGGC AACGGGAAGC CTTTGAAAAT CGCGTAAATT CAAAAGGGTG GCTAGTTCGG 
TGGCCATCGT TGAGAGTTGC GCCATAA
 
Protein sequence
MRWFKCLRWY AEASALRCSH LNRALWRRAK MDKIVELVKQ DPIRVEALNC VSELGLPQCY 
IAAGFVRNLV WDSLHGFKVS TPLNDVDVIY FDPSESNTNT YLEYEAQLKA CMPQLNWQVR 
NQAIMHKRNG DNPYKSSVDA MSYWPEKETA VAIRQIGRNQ YECVAAFGFE SLYSYWVTYN 
PKRQREAFEN RVNSKGWLVR WPSLRVAP