Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001574 |
Symbol | |
ID | 8559887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1779021 |
End bp | 1779710 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646409242 |
Product | arginine ABC transporter permease protein ArtQ |
Protein accession | YP_003288720 |
Protein GI | 262396867 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4215] ABC-type arginine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.552599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTAA CGGGTTACTC TTTATCGCTT GTTCAAGCTA GTTGGATGAC TGTCCAGCTA GCCTTCACAA GTCTTTTAGT CGGTTTGATT CTGGCAGTGG TATTCGCCAG TGGTGAAATG TCTCGCCGCG TTTTCGTTAA ATGGCCAATG ACGGCATTTG TGACGATTGT ACGTGGCTTG CCAGAAATCC TTGTCGTGTT GTTTATCTAT TTTGGTTCGA CGCAGGTTCT GTTTTTAATC ACCGGCGACT TTATTGAAGT TAGCCCGTTC TTGTCTGGTG TAGTGGCGTT GTCGTTGATC TTCGCTTCTT ATGCTTCTCA AACTCTACGT GGCGCATTGA AAGCCGTTGG AAGAGGGCAA AGAGAGGCAG CAAGTGCACT AGGCATCAGT CAGGCACATG CTTTCGTTCG CATTGTTTTG CCACAAGCAG TAAGACACGC GCTACCAGGT TTAACTAACC AATGGTTGGT TCTGTTGAAA GATACCGCGC TTGTATCACT GATTGGCGTA ACGGATTTGT TGAAACAAGC GCAGCTAACG TCTGCTGCGA CGCATGAAGC CTTTACATGG TACGCAACTG CTGCGGCGAT TTACTTAGGC ATTACTTTGA TTACGCAACG TGCCGTAAAA CTGATTGATA AGAAGTTCTC AATTCAAGGC ATGAGTATGG GACAGGAGGC AACCGCATGA
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Protein sequence | MALTGYSLSL VQASWMTVQL AFTSLLVGLI LAVVFASGEM SRRVFVKWPM TAFVTIVRGL PEILVVLFIY FGSTQVLFLI TGDFIEVSPF LSGVVALSLI FASYASQTLR GALKAVGRGQ REAASALGIS QAHAFVRIVL PQAVRHALPG LTNQWLVLLK DTALVSLIGV TDLLKQAQLT SAATHEAFTW YATAAAIYLG ITLITQRAVK LIDKKFSIQG MSMGQEATA
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