Gene VEA_001574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001574 
Symbol 
ID8559887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1779021 
End bp1779710 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content47% 
IMG OID646409242 
Productarginine ABC transporter permease protein ArtQ 
Protein accessionYP_003288720 
Protein GI262396867 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.552599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTAA CGGGTTACTC TTTATCGCTT GTTCAAGCTA GTTGGATGAC TGTCCAGCTA 
GCCTTCACAA GTCTTTTAGT CGGTTTGATT CTGGCAGTGG TATTCGCCAG TGGTGAAATG
TCTCGCCGCG TTTTCGTTAA ATGGCCAATG ACGGCATTTG TGACGATTGT ACGTGGCTTG
CCAGAAATCC TTGTCGTGTT GTTTATCTAT TTTGGTTCGA CGCAGGTTCT GTTTTTAATC
ACCGGCGACT TTATTGAAGT TAGCCCGTTC TTGTCTGGTG TAGTGGCGTT GTCGTTGATC
TTCGCTTCTT ATGCTTCTCA AACTCTACGT GGCGCATTGA AAGCCGTTGG AAGAGGGCAA
AGAGAGGCAG CAAGTGCACT AGGCATCAGT CAGGCACATG CTTTCGTTCG CATTGTTTTG
CCACAAGCAG TAAGACACGC GCTACCAGGT TTAACTAACC AATGGTTGGT TCTGTTGAAA
GATACCGCGC TTGTATCACT GATTGGCGTA ACGGATTTGT TGAAACAAGC GCAGCTAACG
TCTGCTGCGA CGCATGAAGC CTTTACATGG TACGCAACTG CTGCGGCGAT TTACTTAGGC
ATTACTTTGA TTACGCAACG TGCCGTAAAA CTGATTGATA AGAAGTTCTC AATTCAAGGC
ATGAGTATGG GACAGGAGGC AACCGCATGA
 
Protein sequence
MALTGYSLSL VQASWMTVQL AFTSLLVGLI LAVVFASGEM SRRVFVKWPM TAFVTIVRGL 
PEILVVLFIY FGSTQVLFLI TGDFIEVSPF LSGVVALSLI FASYASQTLR GALKAVGRGQ
REAASALGIS QAHAFVRIVL PQAVRHALPG LTNQWLVLLK DTALVSLIGV TDLLKQAQLT
SAATHEAFTW YATAAAIYLG ITLITQRAVK LIDKKFSIQG MSMGQEATA