Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001561 |
Symbol | |
ID | 8559874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1764742 |
End bp | 1765632 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646409230 |
Product | transcriptional regulator LysR family |
Protein accession | YP_003288708 |
Protein GI | 262396855 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATTA AGCTTCAACA ATTAATGCAT TTTGTGATGG TAGTCGAGGA AGGGGGCTTT CGAGCCGCTT CACATCGTGC AAATCGATCT CAGGCTGCGC TCTCCACGTC GATAAAAGAG CTAGAGAAAA TGCTAGGACA AACGCTGTTT GAGCCCGGCA ACAAAACCAA ATTAACGCCT TTTGGTGAGA TTTGTTTGCC CAAGGTGGTT CAGTTTCTCA ATATCTACAG TGCGCTGGAC AACGATCTCA AAGCTGCCGC GGCCGGACAG CAAGGGAGAG TGCGAATTGC GAGCGTTCCT TCTGTTGCAG CGAAACTCAT CCCGAGCGTG TTGGGTGCCT TTTGCGAGCA GTATCCAAAT GTAGAAGTAA GCTTAATCGA TGATAACGCG GCGGGCGTCG AGGCTCGCCT ACTCTCCGGT GAGGTTGACT TAGCGCTCGG TAACCCCTCT CACCTCGATG AGGGCGGCAT TGACTTTACG CCGCTGTTGT CCGACCCCAT TGGCGTGGTG TGTTTAAAAG ATAACCCTAT TGCCGATCAA ACAGAGGGAA TCGAGTGGCA AACTTTGCTC GAACAACCTT TCATTCGTAA CGGCACCTGT ACGCTTCTCG ATCCAACCCC AGCCAGAGCA TTGAGTGAGC AAGCACTCTA TTCGGTCGAG AATATCACTT CGCTGTTTTC TGTCTTAGAA CTTGGGATTG GTGTCACGAC CCTACCGAAG CTTGCTTTCC CAACCAATGA AACACGCTTG GTTTGGATCC CGCTTATCGA TCCACCGCTT GAAAGGCAAA TTGGTATCTT TACGTTGACC GACCGCACGA TCTCGCCTCA AGCTAAAGCG TTTCATGATT TGTGTGTACG TTATCTAAAC TATCAAGATG AAGAAACGTA G
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Protein sequence | MSIKLQQLMH FVMVVEEGGF RAASHRANRS QAALSTSIKE LEKMLGQTLF EPGNKTKLTP FGEICLPKVV QFLNIYSALD NDLKAAAAGQ QGRVRIASVP SVAAKLIPSV LGAFCEQYPN VEVSLIDDNA AGVEARLLSG EVDLALGNPS HLDEGGIDFT PLLSDPIGVV CLKDNPIADQ TEGIEWQTLL EQPFIRNGTC TLLDPTPARA LSEQALYSVE NITSLFSVLE LGIGVTTLPK LAFPTNETRL VWIPLIDPPL ERQIGIFTLT DRTISPQAKA FHDLCVRYLN YQDEET
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