| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001507 |
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| Symbol | |
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| ID | 8559819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1699867 |
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| End bp | 1702893 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646409176 |
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| Product | MSHA biogenesis protein MshQ |
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| Protein accession | YP_003288655 |
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| Protein GI | 262396802 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.101461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTC TTTGCAGTAT TTTCGCTGCG GTTCTTGTTT TACCGCTAGC CTCACACGCC
ACCACTTATG ACGTCAAAGA TCTATCTGAG TTAGGTCAAC TTTGCTCACA CAAGAGTTTT
AGTATCGGAA GCGATGGCAC GACTTATCGC TGTACAGGGG AAATAGTCCT ACCCGCAGGT
GACAAAATTA TCTCCTCATT ACCGGAAAAA GAGATAACGT TAAAAGCAGA TTATGGCATT
GTGTTAGAGG GGAACAATAC GATTGGTGAC CCCAATAAGC GTATCTCTCT ACACGCACTC
GCTACCGGAT TAACGGTTAA CAATGAGAAA GCTTCAAGCA TTGACGATTA CCAAAACAAG
CACACTGTTA TCTATGGTGA TCTTCTATCG GCATATCCAA CAAAGCTGCA TAACATTCTC
ATAGACGGGA ATATTAAGCT AACAGGTTCG ACACTTCACA TTGATGGAGC GCACAACACC
ATTATTGGTG ATATTTCGAC ACACAGCACG ACCGATATAT TCAATGCTAA CGTTTGTGGC
ACCATTGAAT CAAAAGGCCA TCAATTGCAT CTCAAGACGA AGAACCCTCT CCAACGACAT
TTCGTCGTCG GTGATATTGT GGCGCACAGT TCTCTGCTTA TTGATGACAT GGAGATCTAC
GGCACTACTG AGACTAAAGG AGCATCTGCC GCATTGAACG GTTCGTTCTA TGACTCTACT
ACAGCAATTA AATACTTCCA AACATTGAAC TTCAACAACG CTCCAAATCA GCCAAGTCAA
GTTTGTGGTG AAATCCAACA AACGCCAGGA AGTGCACAAA CGAAAGCACA AGACAACAAA
TACACGCAAT ACTGTGGATT GGGCGACACT GATTGTCACT ACTCTTCTCA GCTCTGTCCG
ATCACCCCTC AAGATATTCC GAATTGCAGC ATGCAACCTC CATCAGAGAA CGACTTCGAC
CTAAACGTCA CACCATCGGA CGACATGGCA CTGATGTGCG GCGACGATCT TCCGCAATTT
ACAGCAACAA CAACCAATAA TGGAGAAGTT GTAAGCGCAG AAGTCAGTGC TGCCCTATCA
CACCCTGACT TGTTCACTTT AGAGGTGGTC AAAGGTCAGC AGACATTAAA AGCAAACCAA
TTTATGTCTG ACGACAATGG TAAGCTCGTT GTTCGAGTGG TCCCGAACGA TATTGATACC
ATCGCGTTAG ATACGAACTA CACGCTGACT TTCACTATGG CAGAAGACAC CAGCAAGCAT
CAAACGGTTA GCTTTATGTT TACGCCATAT ATGTTTGAGG CCTACTCAAA GACGAAAAGC
GCAACTTTAA ATGAAATACG CGTTATTGCA GGTAAACCAG AAAACGTGCA TACGCGATTG
CTGGCTTGTG CTTCCACCGG CGAACCTGTA GTCGCAAGCA ACTACAATGG TACTCCTAAG
ATTTTTCATC CATTGGTTCA ACCATTAGGA GGAAGTGAAG GAAACTTTAG CTATTCAGCG
GAATTTAAAG ACGGCTTGTC TGAGCATGGT CTTATCACGA ACGAGTCCGG CATATTTGAA
GTGACATTGT CCGATCATTT TGAATGTGAG GGATTTGAAG AGTGCCCAGA AGAAGGCAAA
GTGGAAGTGA AAGGAACATT TAATGTGTAC TCGCGACCAT GGACATTGGC TATCTGTGAC
AACCAACGTG CTTTGCCTTC TGGCACCTCT GAACAAGGAG ATGGGTTTAT TGCTGCCGGA
GAACTTTTCT CTCTAACAGT GAAACCCATC ATTTGGCAAC CTGACGGCTC TGTAAGTGGC
TCTGTGGAAT CAGCACGTTA TTGTGATGCC TCTATCACCC GTAATTTTAT GCTTGATGAC
GCTCCAGCAG CATCGGTAGT CTTGTCGAGT GAGCAACATA CGCCATCAGA GACAGCGAAC
CAAACCTCGA AATTGCTAAA AAGTAGTGAC TCACTGGCTC AGGCGCATAA TTCAGCCAAG
AATGATCAAT TCGTCTTTAA TGGGTTATAT TGGGAAGAAG TCGGGAGCTT GAGAGTAAAA
GCAAACCTAG AAAGTAAATA TCTAGGTATG ACTGTTAACG AAGGCTATCG TTACATCGGT
CGTTTTTACC CAAAATATTT TCAAGTGCAA GACCAAGAAT GGCACTACCC ACATGGCCAA
ACTTTTGCTT ACATGAATCA ACCTTTTGAG AAAGTCACTT ACGATGTTGT CGCACTCAAT
GCGAATAAGG AAAACGTGAA GAACTACGTC CACTTTTCAT CTAACCTTCA ACAACATTTC
GACTTAGGCG AACTAAGCTC ATACTCCGAA CGGTTTTTGC CGCCTAAGCC TAAGAAGGTA
GACTGGAAAC TACTGGGTAA CGCGAGTGTT GGAACGTTTG TGATCGAGAA GCCCTCGACC
AATGCGACTT GTAACAATAG CCCATGTTGG AAAAAGAACA CAACCGATAA ACAATACCCT
GATGGTCCAT TTAATAATGG GACTAACAGT GACAGCAGCA AAATAGGTAT AGTCACGACT
AAAGCCGTTG ATGAGGTAAA TTTCTTTGAT AACAGCGAAG TGCTCACTCA ACAACCGGAC
ATTCGATTCG GTCGTTTGAA CTTTCAAGAT GTGGGTGGCA ACCAAGGCAT GGTGATCAAA
GTGCCACTTG ATGTGGAAAT TTGGCAAAAC GGTCGATTTA CGACTAACTT CGATGACAGC
TCAACAACGG CGAATGGTGA ATATTACTTC AGCACGCCAA TTTGGTCGCA TGCGCCAGCA
AACAACGCCC TGCTTTCTGG CGTTGGAACG ATGAGTATTG GCAGGATGAC CGATATCGTT
GCAAGCCAAA TTGACTCAGC GCGCGAGCAA ATACAATTCC ACCTAGATTT AGACAGCTCA
GGCAATCGCA TCCCTTGGCT GAAATACGAC TGGGATAGCT CTACAAGTGA AGAGGAAAAC
CCACCCGTCA TTGTTACGTT TGGTATTCAC CGAGGAAACG ATCGCATTAT TTATCGTGGT
GAACCCAATA TGCTTGGCCT AAATTAA
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| Protein sequence | MMRLCSIFAA VLVLPLASHA TTYDVKDLSE LGQLCSHKSF SIGSDGTTYR CTGEIVLPAG
DKIISSLPEK EITLKADYGI VLEGNNTIGD PNKRISLHAL ATGLTVNNEK ASSIDDYQNK
HTVIYGDLLS AYPTKLHNIL IDGNIKLTGS TLHIDGAHNT IIGDISTHST TDIFNANVCG
TIESKGHQLH LKTKNPLQRH FVVGDIVAHS SLLIDDMEIY GTTETKGASA ALNGSFYDST
TAIKYFQTLN FNNAPNQPSQ VCGEIQQTPG SAQTKAQDNK YTQYCGLGDT DCHYSSQLCP
ITPQDIPNCS MQPPSENDFD LNVTPSDDMA LMCGDDLPQF TATTTNNGEV VSAEVSAALS
HPDLFTLEVV KGQQTLKANQ FMSDDNGKLV VRVVPNDIDT IALDTNYTLT FTMAEDTSKH
QTVSFMFTPY MFEAYSKTKS ATLNEIRVIA GKPENVHTRL LACASTGEPV VASNYNGTPK
IFHPLVQPLG GSEGNFSYSA EFKDGLSEHG LITNESGIFE VTLSDHFECE GFEECPEEGK
VEVKGTFNVY SRPWTLAICD NQRALPSGTS EQGDGFIAAG ELFSLTVKPI IWQPDGSVSG
SVESARYCDA SITRNFMLDD APAASVVLSS EQHTPSETAN QTSKLLKSSD SLAQAHNSAK
NDQFVFNGLY WEEVGSLRVK ANLESKYLGM TVNEGYRYIG RFYPKYFQVQ DQEWHYPHGQ
TFAYMNQPFE KVTYDVVALN ANKENVKNYV HFSSNLQQHF DLGELSSYSE RFLPPKPKKV
DWKLLGNASV GTFVIEKPST NATCNNSPCW KKNTTDKQYP DGPFNNGTNS DSSKIGIVTT
KAVDEVNFFD NSEVLTQQPD IRFGRLNFQD VGGNQGMVIK VPLDVEIWQN GRFTTNFDDS
STTANGEYYF STPIWSHAPA NNALLSGVGT MSIGRMTDIV ASQIDSAREQ IQFHLDLDSS
GNRIPWLKYD WDSSTSEEEN PPVIVTFGIH RGNDRIIYRG EPNMLGLN
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