Gene VEA_001275 details

Gene Information

• Locus tag: VEA_001275
• ID: 8559587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1449397
• End bp: 1450065
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 646408944
• Product: transcriptional regulator VpsT
• Protein accession: YP_003288423
• Protein GI: 262396570
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCAAC AAAAAACAAG AAATGTCATT TTAATCACGG AGGGCAGTCT GCAGTCATCT 
CTGCTGAAAG ATGTATTGGA GACCAAACTC GGTATTAGTG TTGCTCTAAT CATACCAGAC 
TCTCTTATTC AAGGAGCGTT AGATTCGCCT TTAGCGTCAG CCATTATTGT TGATTGCAGC 
GTGATCACTG ATGAAATATT TCGGCGTTAT TCGGAATTTA AAGAGTCGCA ACAGAAAGAT 
ACGCTCGAAA TCTTAATTAA TTGTGATCAA TCCATTTCGA CTGAAGATCT TTTTGCTTGG 
CGTACTCTAG CAGGTATTTT TTATACCTCT GATGATATAA AAACGCTGCA AGTTGGGATT 
GATAAGGTAC TTAAGGGGGA TATGTGGTTC AGCCGTAAGT TTTCTCAGCA ATACATTACT 
CACCTTCGTC GCCACTGCAA ACCGATAAAT AAGAACGTTC CCGCTATTTT GACCAAACGA 
GAGAAACAAA TAATTACCTT TCTCTCTATG GGGGCTTCCA ATCAACAAAT TGCCGAACAA 
CTATTTGTGA GCGAGAATAC GGTAAAGACT CATTTACACA ATATTTTCAA GAAGATTGAA 
GTAAAAAATA GAGTCCAAGC ACTTATTTGG GCGAAAGAAA ATATTTCGGA TAACTCGTTA 
ACAGTGTAA 

 

Protein sequence

MEQQKTRNVI LITEGSLQSS LLKDVLETKL GISVALIIPD SLIQGALDSP LASAIIVDCS 
VITDEIFRRY SEFKESQQKD TLEILINCDQ SISTEDLFAW RTLAGIFYTS DDIKTLQVGI 
DKVLKGDMWF SRKFSQQYIT HLRRHCKPIN KNVPAILTKR EKQIITFLSM GASNQQIAEQ 
LFVSENTVKT HLHNIFKKIE VKNRVQALIW AKENISDNSL TV