Gene VEA_001215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001215 
Symbol 
ID8559527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand+ 
Start bp1375999 
End bp1376544 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content44% 
IMG OID646408884 
ProductCsuA 
Protein accessionYP_003288363 
Protein GI262396510 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.748118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCTTC ATATGAAAAT TTTTTGTTTG ATTATTCCCT TGTTATTTAC AGTGTTGAGC 
TTACAAACGA GGGCAGAGAC AATTAGCGGT ACGATAGACG TTTCGATCAA TTTAGTGGAA 
GGCTGTGTCA TTAATGGCAA CAATGCGGTG AACGGTTCCA GTAATATTGG TTTTGGCTCA 
TTAAATTTTG GTGACGTTCC GGCCATTTTT ACTGAGCAAG AAGCAGTCTT GACTGGGGAA 
GGTGGTACGG GGATCGAAAT ACTTTGCAGC AATGGAGTCA CGCCTACTTT CTCTTTAGTC 
AGTGGTGCCA ACGATCCCAG TTCGACGACA GGTAATCACG CAATGACCAA CGGATCCGAG 
TTTGTGGATT ACACTCTCTT CACTGATTCA GATCGTTCTA CCCAGTTTAC CTCGAGTAAC 
CCTATAGCAC TCTCTACATT TAATGGTGTT GATTCAGAGA CCATTAATTT GTACGCCACG 
GCATACGGTA CCAGCAGCGT CGCAGGGAGT TATGTTGATA CACTAAACGT AACTCTGAGT 
TGGTAA
 
Protein sequence
MELHMKIFCL IIPLLFTVLS LQTRAETISG TIDVSINLVE GCVINGNNAV NGSSNIGFGS 
LNFGDVPAIF TEQEAVLTGE GGTGIEILCS NGVTPTFSLV SGANDPSSTT GNHAMTNGSE 
FVDYTLFTDS DRSTQFTSSN PIALSTFNGV DSETINLYAT AYGTSSVAGS YVDTLNVTLS 
W