| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1807 |
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| Symbol | |
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| ID | 5136301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1921495 |
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| End bp | 1924242 |
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| Gene Length | 2748 bp |
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| Protein Length | 915 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640533264 |
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| Product | cation transporter E1-E2 family ATPase |
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| Protein accession | YP_001217732 |
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| Protein GI | 147674687 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACATTC CGCAAGGAGG AGTGATCATG AACCATTTTG CTTTAGCGCT GCGTGGCCTG
AACTGCATGG GCTGTGCGCG AAAATTGGAG CGCCAACTCA ATCAAGATCT CACCGTTGAG
ATCGAAACGC TGACGCCAAC CTCGATTGAA CTGCATACCC ATGCCACCTT AAATGAGGTG
CTCACCAGTA TTGAATCGCT GGGTTATCAA GGCGGTACTG AGCAAACTTA TCAGCTACAA
GGTTTAAATT GTGGTCGCTG TGTGAATAAA CTGACCACGC ACCTCAGCGC GCAGGCAGAG
ATTGCCAAAC TGCACGTCAG TAAAGAGCGG CTTTCACTGG TTACAACCTT AACCGCTGAG
CAAGTAAAAG CGCTAGTGGC GGAAGTGGGC TATCAGGCTA TAGAAGCAGA ACAAGAATCA
ACATTCGCGC CAGCAGCCTC CATTGATGAG AAGGAAACCG ACACGCCTGA CGCTGAGAAC
TCCTCGAACA CAGAAGCCAC TGAGGCGTCT AGCCAAACAC TCTCTCTGCT TATTAAGGGG
ATGACCTGCG CCAGTTGTGT CGCATCGGTG GAAAAAGCCC TGCTTTCTGT TGAGGGAGTG
CAGAGTGCAC AAGTCAACCT CACAGAGCAA AGTGCCTTGG TGAGAGGCAT TTTCGCCAAT
CCGCAACCAC TGCTTAACGC CATTCAAAGT TCTGGCTACC AAGCGGAGAT CTTGGATGAC
CCAGCACAGC AGCAAGCCAA ACAACAAGCG CAATTAGAAG CCTTACAAAA AGAGCATAAA
CAGAGTGCTT TATTAGGTAT CGCTCTGGGT ACGCCTTTAA TGCTGTGGGG CGTGTTTGGC
GGCAACATGA TGATCCGCAA TAGTAGTGAT CAAATGGTCT GGGGGGGAAT CGGCACCATC
TGTTTCGCAC TGCTACTCAC CGCCGGACGC CACTTCTTTA TGAATGCGTG GCAAGCACTG
ACTCATGGCA GAGCGACAAT GGACACCCTA GTCGCACTGG GCACTGGCGC TGCTTGGTTT
TACTCCATGC TCGTGGTAGC TTGGCCGCAA ACGTTCCCTG ATGCAGCGCG TCATGTGTAC
TTCGAAGCAA CGGCAATGAT CATTGGTTTG ATTTCATTGG GTCATTACAT TGAAACCAAA
GCCAAAAGCA ATACTAATCG CTCACTGCAA GCCTTGCTTA ACTTACAACC ACAGCAAGCA
ACGTTGGTGA CTGAACAAGG CGATCAATCC ATCGCCGTCG CTGATATTCA ACTGGGTATG
TCACTGCGCA TCAAACCCGG AGAGCAAGTG CCTGTCGATG GTGTGGTCAG TACTGGTCAC
TCTTATCTGG ATGAGTCCAT GCTCACGGGC GAACCCATTC CTGTACTCAA AGAAGCCGGC
GCGAAAGTCG CAGCGGGCAC ATTGAACCAA GATGGCAGCT TAGTGATCAC CGCTACTGGC
ATTGGTGCGC AAACCATGCT GGCGCGGATT ATCCAGATGG TAAGACAAGC GCAAAGCAGT
AAACCGGCGA TGGCTCGTTT AGCCGATCAG ATTTCCTCTG TTTTCGTGCC CGTTGTTGTT
GTCATTGCCA TCTTGTCTGC CGCACTTTGG TATCTGTATG GCCCCGATCC TAAAGCCAGT
TACATGTTGG TCGTTGCGAC CACTGTATTA ATCATCGCCT GCCCTTGTGC TTTGGGGCTT
GCCACTCCGC TCTCGATTAC CGTAGGTATC GGCAAAGCAG CAGAGATGGG GATTTTAATT
CGCGATGCCA ACGTACTGCA GACCGCAAGT CAGGTAGATA CCGTGGTGTT TGATAAAACG
GGGACGCTGA CCTTAGGCAA ACCGAGTATT CAATCACTGC ATGTGTTGCA GGGTGATGAA
AACCAATTAC TGGCTCTAGC ATACGCCCTT GAGCAGCAAT CAGAACACCC ACTGGCTAAA
GCGATCTGTG ATTACGCGAA ACAACGCAAT ATTAGTCCAG TAGAGATCAG CCAATTCACT
AACCAACGTG GACGTGGACT CTTAGCCGAT TACCAAAATC AAACCGTGCT GGTTGGCTCT
CTCGCTTTTA TGCAAGAACA AGGCATTGAT TTGTCGATGG CTGAATCGAC TCTAGAAAAA
TTTGCAGCAC AAGCGTGGAC GCCGGTGGCG GTGGCTTATC GTGGCATGTT GCAAGGCGTG
TTAGCGATTG CCGACCCGAT CAAGCCCACC TCAGCGCAAG CGGTACGTAA GCTCAATGAG
CTTGGAATTC ATACCGTGAT GCTGACTGGC GATCACACTT CGGTTGCCAA TGCGATTGCC
AAAGAGCTCG GTATCTCGCA AGTGATAGCG CAAGTGCTGC CCGACCAAAA AGCGCAGCAC
ATTCAAGCTT TGCAACAACA AGGCCGTAAA GTCGCCATGA TTGGCGATGG GATTAATGAT
GCCCCAGCTT TAGCGCTGGC TGACATTGGT ATTGCCATGG GCAGTGGCAG TGATGTAGCC
ATTGAGAGCG CACAGATGAC CCTTTTGAAC TCATCACCAA CCAGTGTGGT GAGCGCGATT
GAGCTGTCAA AAGCCACACT GCGCAATATG AAGCAAAACC TGTTTGGCGC ATTTATTTAC
AACACGCTGG GCATTCCTAT CGCAGCGGGT GTGCTTTACC CAGCGTTTGG ATTTTTACTC
AGCCCAGTTG TCGCCGGAGC GGCGATGGCG CTCTCCTCGA TCACCGTGGT CAGCAATGCC
AATCGCCTGC GCTGGAGCAA AATTTCTTTC GATCAACATT CTCAATGA
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| Protein sequence | MDIPQGGVIM NHFALALRGL NCMGCARKLE RQLNQDLTVE IETLTPTSIE LHTHATLNEV
LTSIESLGYQ GGTEQTYQLQ GLNCGRCVNK LTTHLSAQAE IAKLHVSKER LSLVTTLTAE
QVKALVAEVG YQAIEAEQES TFAPAASIDE KETDTPDAEN SSNTEATEAS SQTLSLLIKG
MTCASCVASV EKALLSVEGV QSAQVNLTEQ SALVRGIFAN PQPLLNAIQS SGYQAEILDD
PAQQQAKQQA QLEALQKEHK QSALLGIALG TPLMLWGVFG GNMMIRNSSD QMVWGGIGTI
CFALLLTAGR HFFMNAWQAL THGRATMDTL VALGTGAAWF YSMLVVAWPQ TFPDAARHVY
FEATAMIIGL ISLGHYIETK AKSNTNRSLQ ALLNLQPQQA TLVTEQGDQS IAVADIQLGM
SLRIKPGEQV PVDGVVSTGH SYLDESMLTG EPIPVLKEAG AKVAAGTLNQ DGSLVITATG
IGAQTMLARI IQMVRQAQSS KPAMARLADQ ISSVFVPVVV VIAILSAALW YLYGPDPKAS
YMLVVATTVL IIACPCALGL ATPLSITVGI GKAAEMGILI RDANVLQTAS QVDTVVFDKT
GTLTLGKPSI QSLHVLQGDE NQLLALAYAL EQQSEHPLAK AICDYAKQRN ISPVEISQFT
NQRGRGLLAD YQNQTVLVGS LAFMQEQGID LSMAESTLEK FAAQAWTPVA VAYRGMLQGV
LAIADPIKPT SAQAVRKLNE LGIHTVMLTG DHTSVANAIA KELGISQVIA QVLPDQKAQH
IQALQQQGRK VAMIGDGIND APALALADIG IAMGSGSDVA IESAQMTLLN SSPTSVVSAI
ELSKATLRNM KQNLFGAFIY NTLGIPIAAG VLYPAFGFLL SPVVAGAAMA LSSITVVSNA
NRLRWSKISF DQHSQ
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