Gene VC0395_A1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A1798 
Symbol 
ID5137792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp1904244 
End bp1904681 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content50% 
IMG OID640533255 
Productputative lipoprotein 
Protein accessionYP_001217723 
Protein GI147674431 
COG category[S] Function unknown 
COG ID[COG3018] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAT CTAGCTTACT ACTCCTAGTG GCAGCCTTAA TGATGACGGG ATGCCAACCC 
TTGCAAAGCA TGCGCCCTGA TGATTGGTTA ACGGCGGTTG GCTATGCCAA TATCAGCGAG
CAGAGAGGGC GTGATGAGGC CGAGAAGCAA GTGCGTGCGA TGCGTGCTTC TAAAATTGAT
GCTTACCGCG AGCTTGCTGA GCAGGTGTAT GGTATGCGCA TCAGTGGTCG TGCTGAGTTA
CAAGATCAAC GTCTTGGTAC AGAGTGGACG GCAGGTGCGG TCGATGGTGT GATTCGCGGT
GCTGAAGTGG TACGCAGTTA TAAGGTTGGG GACAGCTATG TCACTGAACT GAGACTTGAT
ATTCGCAAGA TGGACAAGAT GCGTGATTAC GGGGAAGTTC AACAAGTTCC CGAAAAACGA
CAAATGACCC TATTCTAG
 
Protein sequence
MMKSSLLLLV AALMMTGCQP LQSMRPDDWL TAVGYANISE QRGRDEAEKQ VRAMRASKID 
AYRELAEQVY GMRISGRAEL QDQRLGTEWT AGAVDGVIRG AEVVRSYKVG DSYVTELRLD
IRKMDKMRDY GEVQQVPEKR QMTLF