| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1286 |
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| Symbol | sapB |
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| ID | 5135188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1367877 |
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| End bp | 1368839 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640532744 |
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| Product | peptide ABC transporter, permease protein |
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| Protein accession | YP_001217230 |
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| Protein GI | 147673317 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGTCT ATACGGTCCG TAAATTTAAC TTATTTATCA TCACCTTGCT TATCTTGACC
ATGGTCGGCT ACAGCTTAGC CAGATTTGAC CCGCACTCGC CTTGGACGCT GATCGGCTTT
TGGCAAGGAT GGTCAAGCTA TTTAGTGCAA CTGATGGAAT TCAACTTTGG CCTCAATAAA
AATGGGGTGC CGATTATCCA TGAGTTACTG GTGGTATTTC CGGCTACCAT TGAGCTGTGT
ACCATCGCGT TTATCCTCTC TTTGCTCGTA GGAATTCCTA TCGGAACACT GGCGGGAATG
CGACAAGGGA AATGGTTAGA CACTATTATC TCGTTCATTT CGATGTCGGG ATATTCTGCC
CCTATTTTCT GGCTGGCGCT GATGATGATC ATGGCGTTTT CACTGCATTT CCCGGTATTT
CCTGTGGCGG GACGCTATGA CTTGCTGTAT CAAATTGATC ACGTTACCGG CTTTGCCCTG
ATTGATGCCT TTTGGTCTCA ATCCCCCTAC CGCAGCCAAG CACTGCAAAG TGTGATAGAG
CATTTAACGC TGCCCTGCTT AGTGCTGGCG CTGGCGCCGA CCACGCAAGT CATCGGCCAA
ATGCGCGCTT CGGTTGCCGA AGTCATGAAC CAAAACTACA TCCGTGCCGC CAAAATTAAA
GGCTTGTCTA ACTATCAAAT CGTCACTCAG CACGTTTTAC GCAATGCGAT TCCACCGATG
ATCCCGAAAT TTGGCGTTCA ACTTTCCAGC ATGCTGACCT TAGCCATTAT TACTGAATCG
ATCTTTAACT GGCCGGGTAT CGGCCGTTGG TTATTGGATG CATTGGCCAA CCGTGATTTC
ATGTCGATTC AAGCAGGCGT TATCGTTGTC GGTACTCTGG TCCTAACGGC CAATATCCTC
TCTGATTTGA TTGGCGCAGC AGCTAACCCC TTGGTAAGGA AAGAGTGGTA TGTTAAGCGA
TAG
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| Protein sequence | MFVYTVRKFN LFIITLLILT MVGYSLARFD PHSPWTLIGF WQGWSSYLVQ LMEFNFGLNK
NGVPIIHELL VVFPATIELC TIAFILSLLV GIPIGTLAGM RQGKWLDTII SFISMSGYSA
PIFWLALMMI MAFSLHFPVF PVAGRYDLLY QIDHVTGFAL IDAFWSQSPY RSQALQSVIE
HLTLPCLVLA LAPTTQVIGQ MRASVAEVMN QNYIRAAKIK GLSNYQIVTQ HVLRNAIPPM
IPKFGVQLSS MLTLAIITES IFNWPGIGRW LLDALANRDF MSIQAGVIVV GTLVLTANIL
SDLIGAAANP LVRKEWYVKR
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